Functional clusters

Information

  • Type InterPro
  • Description DNA/RNA-binding domain, Est1-type

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ceratophyllum demersum 10 5 CH_cde_427 2 2 0.000473878
Eucalyptus grandis Chr03 5 CH_egr_1190 2 2 0.000175582
Lonicera japonica GWHAAZE00000002 5 CH_lonja_1070 2 2 0.000359324
Olea europaea scaffold760 5 CH_oeu_627 2 2 0.000533789
Papaver somniferum NC_039363.1 5 CH_pso_596 3 8 0.00000149194
Simmondsia chinensis GWHAASQ00000016 5 CH_sci_458 2 2 0.000510856
Sequoiadendron giganteum chr7 5 CH_sgi_2099 2 2 0.000146145
Tripterygium wilfordii NC_052234.1 5 CH_twi_529 2 2 0.00083626
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_712 2 2 0.000557543
Ceratophyllum demersum 10 6 CH_cde_427 2 2 0.000473878
Eucalyptus grandis Chr03 6 CH_egr_1190 2 2 0.000175582
Lonicera japonica GWHAAZE00000002 6 CH_lonja_1070 2 2 0.000359324
Olea europaea scaffold760 6 CH_oeu_627 2 2 0.000533789
Papaver somniferum NC_039363.1 6 CH_pso_596 3 8 0.00000149194
Simmondsia chinensis GWHAASQ00000016 6 CH_sci_458 2 2 0.000510856
Sequoiadendron giganteum chr7 6 CH_sgi_2099 2 2 0.000146145
Tripterygium wilfordii NC_052234.1 6 CH_twi_529 2 2 0.00083626
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_712 2 2 0.000557543

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001