Functional clusters
Information
- Type InterPro
- Description Wax synthase, Magnoliopsida
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR04 | 5 | CH_aox_150 | 3 | 3 | 0.000000192964 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_17 | 7 | 7 | 1.43725e-23 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_532 | 3 | 23 | 0.000359049 |
| Brassica carinata | ChrC04 | 5 | CH_bca_513 | 4 | 11 | 0.0000000706592 |
| Brassica napus | A10 | 5 | CH_bna_437 | 4 | 13 | 0.0000000820019 |
| Brassica rapa | A10 | 5 | CH_bra_214 | 3 | 4 | 0.00000132688 |
| Camellia sinensis var. sinensis | Chr8 | 5 | CH_camsi_527 | 3 | 3 | 0.000000176627 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_231 | 3 | 3 | 0.000000362202 |
| Citrus clementina | scaffold_1 | 5 | CH_ccl_632 | 2 | 2 | 0.000246093 |
| Carpinus fangiana | Cfa08 | 5 | CH_cfa_202 | 3 | 3 | 0.0000000344157 |
| Cardamine hirsuta | Chr8 | 5 | CH_chi_86 | 5 | 5 | 0.0000000000000215749 |
| Carica papaya | supercontig_12 | 5 | CH_cpa_555 | 2 | 2 | 0.000570396 |
| Daucus carota | DCARv2_Chr8 | 5 | CH_dca_594 | 2 | 2 | 0.000382665 |
| Durio zibethinus | NW_019167993.1 | 5 | CH_dzi_531 | 2 | 2 | 0.000463489 |
| Eutrema salsugineum | scaffold_2 | 5 | CH_esa_33 | 6 | 7 | 1.12955e-17 |
| Glycine max | Gm08 | 5 | CH_gma_467 | 3 | 6 | 0.00000518454 |
| Helianthus annuus | HanXRQChr16 | 5 | CH_han_1124 | 2 | 2 | 0.000579643 |
| Lonicera japonica | GWHAAZE00000008 | 5 | CH_lonja_453 | 3 | 3 | 0.000000188297 |
| Malus domestica | Chr02 | 5 | CH_mdo_584 | 3 | 5 | 0.00000120774 |
| Manihot esculenta | Chromosome03 | 5 | CH_mes_33 | 10 | 13 | 1.91696e-28 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_590 | 2 | 2 | 0.000722526 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_591 | 2 | 2 | 0.000722526 |
| Punica granatum | NC_045130.1 | 5 | CH_pgr_249 | 3 | 3 | 0.000000472967 |
| Prunus persica | Pp04 | 5 | CH_ppe_363 | 3 | 3 | 0.000000292152 |
| Prunus persica | Pp04 | 5 | CH_ppe_364 | 3 | 3 | 0.000000292152 |
| Pisum sativum | chr1LG6 | 5 | CH_psa_532 | 2 | 2 | 0.00015649 |
| Populus trichocarpa | Chr09 | 5 | CH_ptr_357 | 3 | 3 | 0.00000042096 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_254 | 3 | 3 | 0.000000161953 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_1382 | 2 | 2 | 0.000597979 |
| Schrenkiella parvula | ch6-6 | 5 | CH_spa_21 | 5 | 5 | 0.0000000000000161436 |
| Trochodendron aralioides | group0 | 5 | CH_tar_334 | 3 | 3 | 0.000000892115 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_177 | 5 | CH_tpr_676 | 2 | 2 | 0.000454184 |
| Vigna mungo | CM024075.1 | 5 | CH_vmu_589 | 2 | 2 | 0.000646141 |
| Aquilegia oxysepala | CHR04 | 6 | CH_aox_150 | 3 | 3 | 0.000000192964 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_17 | 7 | 7 | 1.43725e-23 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_532 | 3 | 23 | 0.000359049 |
| Brassica carinata | ChrC04 | 6 | CH_bca_513 | 4 | 11 | 0.0000000706592 |
| Brassica napus | A10 | 6 | CH_bna_437 | 4 | 13 | 0.0000000820019 |
| Brassica rapa | A10 | 6 | CH_bra_214 | 3 | 4 | 0.00000132688 |
| Camellia sinensis var. sinensis | Chr8 | 6 | CH_camsi_527 | 3 | 3 | 0.000000176627 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_231 | 3 | 3 | 0.000000362202 |
| Citrus clementina | scaffold_1 | 6 | CH_ccl_632 | 2 | 2 | 0.000246093 |
| Carpinus fangiana | Cfa08 | 6 | CH_cfa_202 | 3 | 3 | 0.0000000344157 |
| Cardamine hirsuta | Chr8 | 6 | CH_chi_86 | 5 | 5 | 0.0000000000000215749 |
| Carica papaya | supercontig_12 | 6 | CH_cpa_555 | 2 | 2 | 0.000570396 |
| Daucus carota | DCARv2_Chr8 | 6 | CH_dca_594 | 2 | 2 | 0.000382665 |
| Durio zibethinus | NW_019167993.1 | 6 | CH_dzi_531 | 2 | 2 | 0.000463489 |
| Eutrema salsugineum | scaffold_2 | 6 | CH_esa_33 | 6 | 7 | 1.12955e-17 |
| Glycine max | Gm08 | 6 | CH_gma_467 | 3 | 6 | 0.00000518454 |
| Helianthus annuus | HanXRQChr16 | 6 | CH_han_1124 | 2 | 2 | 0.000579643 |
| Lonicera japonica | GWHAAZE00000008 | 6 | CH_lonja_453 | 3 | 3 | 0.000000188297 |
| Malus domestica | Chr02 | 6 | CH_mdo_584 | 3 | 5 | 0.00000120774 |
| Manihot esculenta | Chromosome03 | 6 | CH_mes_33 | 10 | 13 | 1.91696e-28 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_590 | 2 | 2 | 0.000722526 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_591 | 2 | 2 | 0.000722526 |
| Punica granatum | NC_045130.1 | 6 | CH_pgr_249 | 3 | 3 | 0.000000472967 |
| Prunus persica | Pp04 | 6 | CH_ppe_363 | 3 | 3 | 0.000000292152 |
| Prunus persica | Pp04 | 6 | CH_ppe_364 | 3 | 3 | 0.000000292152 |
| Pisum sativum | chr1LG6 | 6 | CH_psa_532 | 2 | 2 | 0.00015649 |
| Populus trichocarpa | Chr09 | 6 | CH_ptr_357 | 3 | 3 | 0.00000042096 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_254 | 3 | 3 | 0.000000161953 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_1382 | 2 | 2 | 0.000597979 |
| Schrenkiella parvula | ch6-6 | 6 | CH_spa_21 | 5 | 5 | 0.0000000000000161436 |
| Trochodendron aralioides | group0 | 6 | CH_tar_334 | 3 | 3 | 0.000000892115 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_177 | 6 | CH_tpr_676 | 2 | 2 | 0.000454184 |
| Vigna mungo | CM024075.1 | 6 | CH_vmu_589 | 2 | 2 | 0.000646141 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |