Functional clusters

Information

  • Type InterPro
  • Description Sigma intracellular receptor 2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 5 CH_aly_608 2 2 0.000396027
Arabidopsis lyrata scaffold_1 5 CH_aly_609 2 2 0.000396027
Arabidopsis thaliana Chr1 5 CH_ath_424 2 2 0.0000859476
Cannabis sativa NC_044379.1 5 CH_cansat_404 2 2 0.0000656642
Corchorus olitorius AWUE01019666.1 5 CH_col_5 9 9 7.54288e-26
Davidia involucrata GWHABJS00000013 5 CH_din_846 2 4 0.00090015
Durio zibethinus NW_019168270.1 5 CH_dzi_489 2 2 0.000278093
Durio zibethinus NW_019167971.1 5 CH_dzi_607 2 3 0.000834235
Fragaria vesca Fvb6 5 CH_fve_397 3 8 0.00000116579
Gossypium hirsutum A12 5 CH_ghi_1122 2 2 0.000400523
Gossypium hirsutum D12 5 CH_ghi_1123 2 2 0.000400523
Gossypium raimondii Chr08 5 CH_gra_514 2 2 0.000160832
Malus domestica Chr17 5 CH_mdo_90 5 7 0.00000000000000195424
Oryza sativa ssp. japonica chr07 5 CH_osa_589 2 2 0.000158437
Prunus persica Pp03 5 CH_ppe_306 3 4 0.0000000333876
Papaver somniferum NC_039363.1 5 CH_pso_1033 2 2 0.000225294
Solanum lycopersicum SL4.0ch07 5 CH_sly_598 2 2 0.0000586941
Solanum pennellii Spenn-ch07 5 CH_spe_556 2 2 0.000044479
Solanum tuberosum ST4.03ch07 5 CH_stu_600 2 2 0.0000512453
Trochodendron aralioides group3 5 CH_tar_619 2 3 0.000180104
Tripterygium wilfordii NC_052237.1 5 CH_twi_407 2 2 0.000167252
Arabidopsis lyrata scaffold_4 6 CH_aly_608 2 2 0.000396027
Arabidopsis lyrata scaffold_1 6 CH_aly_609 2 2 0.000396027
Arabidopsis thaliana Chr1 6 CH_ath_424 2 2 0.0000859476
Cannabis sativa NC_044379.1 6 CH_cansat_404 2 2 0.0000656642
Corchorus olitorius AWUE01019666.1 6 CH_col_5 9 9 7.54288e-26
Davidia involucrata GWHABJS00000013 6 CH_din_846 2 4 0.00090015
Durio zibethinus NW_019168270.1 6 CH_dzi_489 2 2 0.000278093
Durio zibethinus NW_019167971.1 6 CH_dzi_607 2 3 0.000834235
Fragaria vesca Fvb6 6 CH_fve_397 3 8 0.00000116579
Gossypium hirsutum A12 6 CH_ghi_1122 2 2 0.000400523
Gossypium hirsutum D12 6 CH_ghi_1123 2 2 0.000400523
Gossypium raimondii Chr08 6 CH_gra_514 2 2 0.000160832
Malus domestica Chr17 6 CH_mdo_90 5 7 0.00000000000000195424
Oryza sativa ssp. japonica chr07 6 CH_osa_589 2 2 0.000158437
Prunus persica Pp03 6 CH_ppe_306 3 4 0.0000000333876
Papaver somniferum NC_039363.1 6 CH_pso_1033 2 2 0.000225294
Solanum lycopersicum SL4.0ch07 6 CH_sly_598 2 2 0.0000586941
Solanum pennellii Spenn-ch07 6 CH_spe_556 2 2 0.000044479
Solanum tuberosum ST4.03ch07 6 CH_stu_600 2 2 0.0000512453
Trochodendron aralioides group3 6 CH_tar_619 2 3 0.000180104
Tripterygium wilfordii NC_052237.1 6 CH_twi_407 2 2 0.000167252

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001