Functional clusters
Information
- Type InterPro
- Description Ubiquitin-conjugating enzyme/RWD-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 5 | CH_arhy_1046 | 3 | 3 | 0.00021088 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 5 | CH_eca_702 | 3 | 3 | 0.000277512 |
| Lupinus albus | Lalb_Chr21 | 5 | CH_lal_670 | 3 | 3 | 0.000518861 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 5 | CH_lsa_432 | 4 | 5 | 0.00000137749 |
| Papaver somniferum | NC_039361.1 | 5 | CH_pso_162 | 10 | 44 | 0.000000000000115442 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 6 | CH_arhy_1046 | 3 | 3 | 0.00021088 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 6 | CH_eca_702 | 3 | 3 | 0.000277512 |
| Lupinus albus | Lalb_Chr21 | 6 | CH_lal_670 | 3 | 3 | 0.000518861 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 6 | CH_lsa_432 | 4 | 5 | 0.00000137749 |
| Papaver somniferum | NC_039361.1 | 6 | CH_pso_162 | 10 | 44 | 0.000000000000115442 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |