Functional clusters
Information
- Type InterPro
- Description Acyl transferase/acyl hydrolase/lysophospholipase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group25 | 5 | CH_ach_568 | 3 | 7 | 0.000627529 |
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_511 | 3 | 6 | 0.000563129 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 5 | CH_arhy_812 | 3 | 3 | 0.0000165922 |
| Amborella trichopoda | AmTr_v1.0_scaffold00126 | 5 | CH_atr_18 | 10 | 10 | 8.26175e-29 |
| Camellia sinensis var. sinensis | Chr1 | 5 | CH_camsi_677 | 4 | 15 | 0.00000190642 |
| Corylus avellana | 7 | 5 | CH_cav_132 | 5 | 8 | 0.000000000168543 |
| Coffea canephora | chr10 | 5 | CH_ccan_40 | 6 | 78 | 0.0000000000011963 |
| Ceratophyllum demersum | 3 | 5 | CH_cde_3 | 11 | 14 | 4.63467e-27 |
| Daucus carota | DCARv2_Chr3 | 5 | CH_dca_47 | 7 | 15 | 0.0000000000000223436 |
| Davidia involucrata | GWHABJS00000014 | 5 | CH_din_228 | 5 | 16 | 0.0000000346127 |
| Eucalyptus grandis | Chr06 | 5 | CH_egr_11 | 24 | 50 | 6.39858e-54 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_182 | 6 | 9 | 0.0000000000013241 |
| Hydrangea macrophylla | Hma1.2p1_0337F.1 | 5 | CH_hma_30 | 6 | 14 | 0.00000000000195636 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_3 | 22 | 26 | 3.77434e-60 |
| Magnolia biondii | Chr06 | 5 | CH_mbi_53 | 8 | 18 | 2.13185e-19 |
| Malus domestica | Chr08 | 5 | CH_mdo_106 | 7 | 15 | 0.0000000000000125326 |
| Malus domestica | Chr15 | 5 | CH_mdo_87 | 7 | 12 | 0.00000000000000154479 |
| Olea europaea | chr5 | 5 | CH_oeu_291 | 4 | 39 | 0.0000372552 |
| Petunia axillaris | Peaxi162Scf00964 | 5 | CH_pax_364 | 3 | 4 | 0.0000287667 |
| Populus trichocarpa | Chr17 | 5 | CH_ptr_45 | 9 | 9 | 9.96607e-23 |
| Quercus lobata | 10 | 5 | CH_qlo_1146 | 3 | 3 | 0.0000218154 |
| Quercus lobata | CM012294 | 5 | CH_qlo_83 | 10 | 11 | 1.88151e-26 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 5 | CH_rch_838 | 3 | 3 | 0.00000780967 |
| Rhododendron simsii | chr07 | 5 | CH_rsi_84 | 8 | 9 | 1.38945e-19 |
| Salix brachista | GWHAAZH00000014 | 5 | CH_sbr_40 | 8 | 9 | 1.17635e-19 |
| Simmondsia chinensis | GWHAASQ00000015 | 5 | CH_sci_78 | 4 | 4 | 0.00000000132411 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_101 | 10 | 11 | 1.58159e-27 |
| Solanum lycopersicum | SL4.0ch04 | 5 | CH_sly_141 | 5 | 5 | 0.00000000000299562 |
| Solanum pennellii | Spenn-ch02 | 5 | CH_spe_385 | 4 | 14 | 0.00000233171 |
| Solanum tuberosum | ST4.03ch08 | 5 | CH_stu_69 | 7 | 10 | 4.19242e-17 |
| Trochodendron aralioides | group2 | 5 | CH_tar_191 | 5 | 11 | 0.0000000195283 |
| Trochodendron aralioides | group4 | 5 | CH_tar_238 | 7 | 75 | 0.0000000713066 |
| Trochodendron aralioides | group11 | 5 | CH_tar_474 | 3 | 3 | 0.0000420105 |
| Theobroma cacao | Chromosome_5 | 5 | CH_tca_157 | 5 | 6 | 0.0000000000340835 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_119 | 5 | CH_tpr_151 | 4 | 4 | 0.00000000778891 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_385 | 3 | 3 | 0.000011432 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_137 | 5 | 9 | 0.00000000462021 |
| Vigna mungo | CM024078.1 | 5 | CH_vmu_3 | 16 | 28 | 2.01923e-37 |
| Vigna mungo | CM024073.1 | 5 | CH_vmu_74 | 5 | 5 | 0.0000000000492932 |
| Vitis vinifera | chr18 | 5 | CH_vvi_15 | 14 | 17 | 4.79212e-35 |
| Vitis vinifera | chrUn | 5 | CH_vvi_267 | 4 | 4 | 0.0000000691338 |
| Actinidia chinensis | Lachesis_group25 | 6 | CH_ach_568 | 3 | 7 | 0.000627529 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_511 | 3 | 6 | 0.000563129 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 6 | CH_arhy_812 | 3 | 3 | 0.0000165922 |
| Amborella trichopoda | AmTr_v1.0_scaffold00126 | 6 | CH_atr_18 | 10 | 10 | 8.26175e-29 |
| Camellia sinensis var. sinensis | Chr1 | 6 | CH_camsi_677 | 4 | 15 | 0.00000190642 |
| Corylus avellana | 7 | 6 | CH_cav_132 | 5 | 8 | 0.000000000168543 |
| Coffea canephora | chr10 | 6 | CH_ccan_40 | 6 | 78 | 0.0000000000011963 |
| Ceratophyllum demersum | 3 | 6 | CH_cde_3 | 11 | 14 | 4.63467e-27 |
| Daucus carota | DCARv2_Chr3 | 6 | CH_dca_47 | 7 | 15 | 0.0000000000000223436 |
| Davidia involucrata | GWHABJS00000014 | 6 | CH_din_228 | 5 | 16 | 0.0000000346127 |
| Eucalyptus grandis | Chr06 | 6 | CH_egr_11 | 24 | 50 | 6.39858e-54 |
| Fragaria x ananassa | Fvb1-3 | 6 | CH_fan_755 | 4 | 20 | 0.0000446012 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_182 | 6 | 9 | 0.0000000000013241 |
| Hydrangea macrophylla | Hma1.2p1_0337F.1 | 6 | CH_hma_30 | 6 | 14 | 0.00000000000195636 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_3 | 22 | 26 | 3.77434e-60 |
| Magnolia biondii | Chr06 | 6 | CH_mbi_53 | 8 | 18 | 2.13185e-19 |
| Malus domestica | Chr08 | 6 | CH_mdo_106 | 7 | 15 | 0.0000000000000125326 |
| Malus domestica | Chr15 | 6 | CH_mdo_87 | 7 | 12 | 0.00000000000000154479 |
| Olea europaea | chr5 | 6 | CH_oeu_291 | 4 | 39 | 0.0000372552 |
| Petunia axillaris | Peaxi162Scf00964 | 6 | CH_pax_364 | 3 | 4 | 0.0000287667 |
| Populus trichocarpa | Chr17 | 6 | CH_ptr_45 | 9 | 9 | 9.96607e-23 |
| Quercus lobata | 10 | 6 | CH_qlo_1146 | 3 | 3 | 0.0000218154 |
| Quercus lobata | CM012294 | 6 | CH_qlo_83 | 10 | 11 | 1.88151e-26 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 6 | CH_rch_838 | 3 | 3 | 0.00000780967 |
| Rhododendron simsii | chr07 | 6 | CH_rsi_84 | 8 | 9 | 1.38945e-19 |
| Salix brachista | GWHAAZH00000014 | 6 | CH_sbr_40 | 8 | 9 | 1.17635e-19 |
| Simmondsia chinensis | GWHAASQ00000015 | 6 | CH_sci_78 | 4 | 4 | 0.00000000132411 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_101 | 10 | 11 | 1.58159e-27 |
| Solanum lycopersicum | SL4.0ch04 | 6 | CH_sly_141 | 5 | 5 | 0.00000000000299562 |
| Solanum pennellii | Spenn-ch02 | 6 | CH_spe_385 | 4 | 14 | 0.00000233171 |
| Solanum tuberosum | ST4.03ch08 | 6 | CH_stu_69 | 7 | 10 | 4.19242e-17 |
| Trochodendron aralioides | group2 | 6 | CH_tar_191 | 5 | 11 | 0.0000000195283 |
| Trochodendron aralioides | group4 | 6 | CH_tar_238 | 7 | 75 | 0.0000000713066 |
| Trochodendron aralioides | group11 | 6 | CH_tar_474 | 3 | 3 | 0.0000420105 |
| Theobroma cacao | Chromosome_5 | 6 | CH_tca_157 | 5 | 6 | 0.0000000000340835 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_119 | 6 | CH_tpr_151 | 4 | 4 | 0.00000000778891 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_385 | 3 | 3 | 0.000011432 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_137 | 5 | 9 | 0.00000000462021 |
| Vigna mungo | CM024078.1 | 6 | CH_vmu_3 | 16 | 28 | 2.01923e-37 |
| Vigna mungo | CM024073.1 | 6 | CH_vmu_74 | 5 | 5 | 0.0000000000492932 |
| Vitis vinifera | chr18 | 6 | CH_vvi_15 | 14 | 17 | 4.79212e-35 |
| Vitis vinifera | chrUn | 6 | CH_vvi_267 | 4 | 4 | 0.0000000691338 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |