Functional clusters

Information

  • Type InterPro
  • Description Glycoside hydrolase family 20, catalytic domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 5 CH_acertr_277 3 3 0.00000007455
Amborella trichopoda AmTr_v1.0_scaffold00068 5 CH_atr_262 3 5 0.000000946474
Chara braunii BFEA01000003 5 CH_cbr_192 2 2 0.0000719269
Coffea canephora chr2 5 CH_ccan_237 3 30 0.00000198797
Citrus clementina scaffold_3 5 CH_ccl_779 2 2 0.000820311
Chenopodium quinoa C_Quinoa_Scaffold_3163 5 CH_cqu_1072 2 2 0.000995025
Lonicera japonica GWHAAZE00000001 5 CH_lonja_433 3 3 0.000000107598
Magnolia biondii Chr01 5 CH_mbi_461 3 5 0.000000353765
Olea europaea chr16 5 CH_oeu_674 2 2 0.000800683
Quercus lobata 4 5 CH_qlo_1065 3 6 0.00000671448
Salvia bowleyana GWHASIU00000001 5 CH_sbo_665 3 31 0.000278577
Selaginella moellendorffii scaffold_55 5 CH_smo_137 4 24 0.00000325481
Solanum pennellii Spenn-ch05 5 CH_spe_728 2 2 0.000266874
Acer truncatum chr10 6 CH_acertr_277 3 3 0.00000007455
Amborella trichopoda AmTr_v1.0_scaffold00068 6 CH_atr_262 3 5 0.000000946474
Chara braunii BFEA01000003 6 CH_cbr_192 2 2 0.0000719269
Coffea canephora chr2 6 CH_ccan_237 3 30 0.00000198797
Citrus clementina scaffold_3 6 CH_ccl_779 2 2 0.000820311
Chenopodium quinoa C_Quinoa_Scaffold_3163 6 CH_cqu_1072 2 2 0.000995025
Lonicera japonica GWHAAZE00000001 6 CH_lonja_433 3 3 0.000000107598
Magnolia biondii Chr01 6 CH_mbi_461 3 5 0.000000353765
Olea europaea chr16 6 CH_oeu_674 2 2 0.000800683
Quercus lobata 4 6 CH_qlo_1065 3 6 0.00000671448
Salvia bowleyana GWHASIU00000001 6 CH_sbo_665 3 31 0.000278577
Selaginella moellendorffii scaffold_55 6 CH_smo_137 4 24 0.00000325481
Solanum pennellii Spenn-ch05 6 CH_spe_728 2 2 0.000266874

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001