Functional clusters

Information

  • Type InterPro
  • Description Galactose oxidase-like, Early set domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold1271 5 CH_can_313 3 3 0.000000204743
Gossypium hirsutum A08 5 CH_ghi_202 5 5 0.000000000000543345
Gossypium hirsutum D08 5 CH_ghi_347 4 4 0.00000000156523
Gossypium hirsutum A09 5 CH_ghi_658 3 3 0.00000434206
Gossypium raimondii Chr04 5 CH_gra_184 4 4 0.00000000110024
Gossypium raimondii Chr06 5 CH_gra_185 4 4 0.00000000110024
Malus domestica Chr15 5 CH_mdo_261 4 4 0.000000000389375
Malus domestica Chr08 5 CH_mdo_758 3 5 0.0000146616
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_910 3 6 0.0000216806
Rhododendron simsii chr10 5 CH_rsi_887 2 2 0.000387184
Solanum lycopersicum SL4.0ch04 5 CH_sly_175 4 4 0.000000000127398
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_803 2 2 0.000929238
Vanilla planifolia CM028154.1 5 CH_vpl_162 4 27 0.000000317906
Capsicum annuum PGAv.1.6.scaffold1271 6 CH_can_313 3 3 0.000000204743
Gossypium hirsutum A08 6 CH_ghi_202 5 5 0.000000000000543345
Gossypium hirsutum D08 6 CH_ghi_347 4 4 0.00000000156523
Gossypium hirsutum A09 6 CH_ghi_658 3 3 0.00000434206
Gossypium raimondii Chr04 6 CH_gra_184 4 4 0.00000000110024
Gossypium raimondii Chr06 6 CH_gra_185 4 4 0.00000000110024
Malus domestica Chr15 6 CH_mdo_261 4 4 0.000000000389375
Malus domestica Chr08 6 CH_mdo_758 3 5 0.0000146616
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_910 3 6 0.0000216806
Rhododendron simsii chr10 6 CH_rsi_887 2 2 0.000387184
Solanum lycopersicum SL4.0ch04 6 CH_sly_175 4 4 0.000000000127398
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_803 2 2 0.000929238
Vanilla planifolia CM028154.1 6 CH_vpl_162 4 27 0.000000317906

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001