Functional clusters

Information

  • Type InterPro
  • Description Quinone oxidoreductase PIG3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 5 CH_acertr_588 2 2 0.000070497
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 5 CH_arhy_944 2 2 0.000089815
Cicer arietinum L. Ca_LG1_v3 5 CH_car_218 2 2 0.0000778301
Corylus avellana 2 5 CH_cav_509 2 2 0.0000766695
Carpinus fangiana Cfa01 5 CH_cfa_411 2 2 0.0000757346
Cardamine hirsuta Chr7 5 CH_chi_495 2 2 0.0000691204
Corchorus olitorius AWUE01020860.1 5 CH_col_156 2 2 0.000292099
Eucalyptus grandis Chr01 5 CH_egr_1189 2 2 0.000175582
Fragaria vesca Fvb3 5 CH_fve_760 2 3 0.000530165
Gossypium hirsutum D05 5 CH_ghi_1045 2 2 0.000267016
Gossypium raimondii Chr09 5 CH_gra_512 2 2 0.000160832
Hydrangea macrophylla Hma1.2p1_0144F.1 5 CH_hma_94 3 3 0.0000000185113
Manihot esculenta Chromosome16 5 CH_mes_501 2 2 0.0000610631
Olea europaea chr21 5 CH_oeu_337 2 2 0.0000533789
Pisum sativum chr1LG6 5 CH_psa_456 2 2 0.0000521635
Quercus lobata 5 5 CH_qlo_1257 2 2 0.0000516289
Rhododendron simsii chr13 5 CH_rsi_683 2 2 0.0000645307
Trochodendron aralioides group3 5 CH_tar_513 2 2 0.0000600366
Theobroma cacao Chromosome_6 5 CH_tca_532 2 2 0.0000732386
Tripterygium wilfordii NC_052240.1 5 CH_twi_346 2 2 0.0000557507
Vitis vinifera chrUn 5 CH_vvi_515 2 2 0.000076063
Acer truncatum chr10 6 CH_acertr_588 2 2 0.000070497
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 6 CH_arhy_944 2 2 0.000089815
Cicer arietinum L. Ca_LG1_v3 6 CH_car_218 2 2 0.0000778301
Corylus avellana 2 6 CH_cav_509 2 2 0.0000766695
Carpinus fangiana Cfa01 6 CH_cfa_411 2 2 0.0000757346
Cardamine hirsuta Chr7 6 CH_chi_495 2 2 0.0000691204
Corchorus olitorius AWUE01020860.1 6 CH_col_156 2 2 0.000292099
Eucalyptus grandis Chr01 6 CH_egr_1189 2 2 0.000175582
Fragaria x ananassa Fvb3-2 6 CH_fan_1019 2 2 0.000388576
Fragaria vesca Fvb3 6 CH_fve_760 2 3 0.000530165
Gossypium hirsutum D05 6 CH_ghi_1045 2 2 0.000267016
Gossypium raimondii Chr09 6 CH_gra_512 2 2 0.000160832
Hydrangea macrophylla Hma1.2p1_0144F.1 6 CH_hma_94 3 3 0.0000000185113
Manihot esculenta Chromosome16 6 CH_mes_501 2 2 0.0000610631
Olea europaea chr21 6 CH_oeu_337 2 2 0.0000533789
Pisum sativum chr1LG6 6 CH_psa_456 2 2 0.0000521635
Quercus lobata 5 6 CH_qlo_1257 2 2 0.0000516289
Rhododendron simsii chr13 6 CH_rsi_683 2 2 0.0000645307
Trochodendron aralioides group3 6 CH_tar_513 2 2 0.0000600366
Theobroma cacao Chromosome_6 6 CH_tca_532 2 2 0.0000732386
Tripterygium wilfordii NC_052240.1 6 CH_twi_346 2 2 0.0000557507
Vitis vinifera chrUn 6 CH_vvi_515 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001