Functional clusters

Information

  • Type InterPro
  • Description E3 ubiquitin ligase Bre1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00024 5 CH_atr_499 2 2 0.000238322
Corylus avellana 1 5 CH_cav_640 2 2 0.000230008
Carica papaya supercontig_119 5 CH_cpa_575 2 2 0.000570396
Carica papaya supercontig_101 5 CH_cpa_576 2 2 0.000570396
Malus domestica Chr15 5 CH_mdo_1310 2 2 0.000568817
Olea europaea chr15 5 CH_oeu_625 2 2 0.000533789
Petunia axillaris Peaxi162Scf00018 5 CH_pax_633 2 2 0.000422134
Petunia axillaris Peaxi162Scf00100 5 CH_pax_634 2 2 0.000422134
Physcomitrium patens Chr10 5 CH_ppa_416 2 2 0.000919089
Striga asiatica scaffold153 5 CH_sas_95 3 10 0.00000703598
Sequoiadendron giganteum chr10 5 CH_sgi_1721 2 2 0.0000487151
Sapria himalayana scaffold84_1800311 5 CH_shi_488 2 2 0.000343083
Sapria himalayana scaffold16_12220143 5 CH_shi_489 2 2 0.000343083
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_606 2 2 0.000278772
Amborella trichopoda AmTr_v1.0_scaffold00024 6 CH_atr_499 2 2 0.000238322
Corylus avellana 1 6 CH_cav_640 2 2 0.000230008
Carica papaya supercontig_119 6 CH_cpa_575 2 2 0.000570396
Carica papaya supercontig_101 6 CH_cpa_576 2 2 0.000570396
Malus domestica Chr15 6 CH_mdo_1310 2 2 0.000568817
Olea europaea chr15 6 CH_oeu_625 2 2 0.000533789
Petunia axillaris Peaxi162Scf00018 6 CH_pax_633 2 2 0.000422134
Petunia axillaris Peaxi162Scf00100 6 CH_pax_634 2 2 0.000422134
Physcomitrium patens Chr10 6 CH_ppa_416 2 2 0.000919089
Striga asiatica scaffold153 6 CH_sas_95 3 10 0.00000703598
Sequoiadendron giganteum chr10 6 CH_sgi_1721 2 2 0.0000487151
Sapria himalayana scaffold84_1800311 6 CH_shi_488 2 2 0.000343083
Sapria himalayana scaffold16_12220143 6 CH_shi_489 2 2 0.000343083
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_606 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001