Functional clusters
Information
- Type InterPro
- Description Aldolase-type TIM barrel
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 5 | CH_aag_250 | 4 | 9 | 0.000198831 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_590 | 4 | 12 | 0.000688166 |
| Cucumis sativus L. | chr7 | 5 | CH_csa_202 | 5 | 7 | 0.000000297923 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_653 | 9 | 59 | 0.0000000238838 |
| Prunus persica | Pp08 | 5 | CH_ppe_528 | 4 | 5 | 0.0000224303 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_275 | 7 | 9 | 0.00000000000527876 |
| Anthoceros agrestis | Sc2ySwM_228 | 6 | CH_aag_250 | 4 | 9 | 0.000198831 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_590 | 4 | 12 | 0.000688166 |
| Cucumis melo | chr01 | 6 | CH_cme_246 | 4 | 5 | 0.0000108495 |
| Cucumis sativus L. | chr7 | 6 | CH_csa_202 | 5 | 7 | 0.000000297923 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_653 | 9 | 59 | 0.0000000238838 |
| Prunus persica | Pp08 | 6 | CH_ppe_528 | 4 | 5 | 0.0000224303 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_275 | 7 | 9 | 0.00000000000527876 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |