Functional clusters

Information

  • Type InterPro
  • Description Exonuclease, RNase T/DNA polymerase III

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_7 5 CH_ccl_353 4 9 0.000000636964
Citrus clementina scaffold_3 5 CH_ccl_472 3 4 0.0000329305
Ceratophyllum demersum 1 5 CH_cde_150 3 3 0.00000523994
Eucalyptus grandis Chr11 5 CH_egr_947 3 4 0.00000934905
Hydrangea macrophylla Hma1.2p1_0416F.1 5 CH_hma_497 3 12 0.00025594
Malus domestica Chr14 5 CH_mdo_326 4 5 0.00000000489446
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_1023 3 8 0.0000485487
Simmondsia chinensis GWHAASQ00000015 5 CH_sci_482 3 12 0.000524758
Sequoiadendron giganteum chr6 5 CH_sgi_294 6 7 1.29771e-16
Citrus clementina scaffold_7 6 CH_ccl_353 4 9 0.000000636964
Citrus clementina scaffold_3 6 CH_ccl_472 3 4 0.0000329305
Ceratophyllum demersum 1 6 CH_cde_150 3 3 0.00000523994
Eucalyptus grandis Chr11 6 CH_egr_947 3 4 0.00000934905
Hydrangea macrophylla Hma1.2p1_0416F.1 6 CH_hma_497 3 12 0.00025594
Malus domestica Chr14 6 CH_mdo_326 4 5 0.00000000489446
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_1023 3 8 0.0000485487
Simmondsia chinensis GWHAASQ00000015 6 CH_sci_482 3 12 0.000524758
Sequoiadendron giganteum chr6 6 CH_sgi_294 6 7 1.29771e-16

Available child term results

Ontology identifier Description Number of clusters
IPR034922 RNA exonuclease 1-like, exonuclease domain 6
IPR037431 RNA exonuclease 4, DEDDh 3'-5' exonuclease domain 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001