Functional clusters

Information

  • Type InterPro
  • Description Alcohol dehydrogenase, N-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 5 CH_acertr_503 3 3 0.0000406745
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 5 CH_arhy_545 4 4 0.000000355935
Arabidopsis thaliana Chr4 5 CH_ath_387 3 5 0.0000403107
Amborella trichopoda AmTr_v1.0_scaffold00040 5 CH_atr_209 4 5 0.000000153868
Beta vulgaris Chr1_EL10_PGA_scaffold3 5 CH_bvu_372 3 4 0.0000831864
Camellia sinensis var. sinensis Chr7 5 CH_camsi_134 8 15 0.0000000000000200647
Camellia sinensis var. sinensis Chr2 5 CH_camsi_207 8 26 0.00000000000479413
Camellia sinensis var. sinensis Chr7 5 CH_camsi_766 4 6 0.00000617226
Corylus avellana 2 5 CH_cav_367 4 8 0.00000622517
Corylus avellana 7 5 CH_cav_766 3 5 0.00068374
Carpinus fangiana Cfa07 5 CH_cfa_250 4 4 0.000000325702
Carya illinoinensis Chr11 5 CH_cil_201 6 8 0.0000000000573467
Carya illinoinensis Chr15 5 CH_cil_381 4 4 0.000000547617
Chenopodium quinoa C_Quinoa_Scaffold_3356 5 CH_cqu_966 3 4 0.000615716
Davidia involucrata GWHABJS00000011 5 CH_din_308 4 7 0.000000967572
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_186 5 10 0.00000000383438
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_485 3 3 0.0000254796
Eucalyptus grandis Chr11 5 CH_egr_1100 4 7 0.0000610793
Eucalyptus grandis Chr08 5 CH_egr_1377 3 3 0.000666782
Eucalyptus grandis Chr05 5 CH_egr_236 9 13 1.33126e-16
Eucalyptus grandis Chr04 5 CH_egr_426 6 6 0.0000000000117816
Eucalyptus grandis Chr06 5 CH_egr_580 5 5 0.00000000457445
Eucalyptus grandis Chr09 5 CH_egr_857 4 4 0.00000175623
Fragaria vesca Fvb1 5 CH_fve_116 7 16 0.0000000000027467
Gossypium hirsutum A02 5 CH_ghi_612 4 5 0.00000204231
Glycine max Gm01 5 CH_gma_611 3 3 0.0001083
Gossypium raimondii Chr07 5 CH_gra_526 3 3 0.000163052
Helianthus annuus HanXRQChr14 5 CH_han_203 7 16 0.00000000000483941
Helianthus annuus HanXRQChr05 5 CH_han_262 5 5 0.000000000251228
Helianthus annuus HanXRQChr08 5 CH_han_602 5 19 0.00000287604
Lonicera japonica GWHAAZE00000040 5 CH_lonja_119 9 12 1.90248e-18
Lonicera japonica GWHAAZE00000004 5 CH_lonja_980 3 3 0.000246185
Lonicera japonica GWHAAZE00000004 5 CH_lonja_981 3 3 0.000246185
Lactuca sativa Lsat_1_v8_lg_8 5 CH_lsa_208 5 5 0.000000000399223
Magnolia biondii Chr12 5 CH_mbi_521 5 25 0.00000109758
Malus domestica Chr01 5 CH_mdo_119 8 15 0.0000000000000495854
Malus domestica Chr15 5 CH_mdo_342 5 6 0.00000000773955
Manihot esculenta Chromosome18 5 CH_mes_443 4 8 0.0000174721
Punica granatum NC_045132.1 5 CH_pgr_234 5 11 0.000000230774
Papaver somniferum NC_039363.1 5 CH_pso_557 4 7 0.000000668758
Papaver somniferum NC_039363.1 5 CH_pso_667 4 10 0.00000400612
Populus trichocarpa Chr07 5 CH_ptr_323 4 4 0.000000156846
Populus trichocarpa Chr05 5 CH_ptr_711 3 4 0.000442527
Quercus lobata 6 5 CH_qlo_134 12 27 5.08651e-22
Quercus lobata 11 5 CH_qlo_1533 3 3 0.000248686
Quercus lobata CM012294 5 CH_qlo_400 10 65 0.00000000000190574
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_1203 3 3 0.000235458
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_160 9 20 6.16209e-16
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_471 6 17 0.0000000120811
Salix brachista GWHAAZH00000011 5 CH_sbr_165 6 13 0.000000000872945
Simmondsia chinensis GWHAASQ00000015 5 CH_sci_255 3 3 0.0000488802
Sequoiadendron giganteum chr7 5 CH_sgi_1952 3 3 0.000121818
Solanum tuberosum ST4.03ch09 5 CH_stu_257 5 9 0.00000000427564
Solanum tuberosum ST4.03ch03 5 CH_stu_559 3 3 0.0000389195
Selenicereus undatus Scaffold_33679 5 CH_sun_156 3 3 0.0000392849
Trochodendron aralioides group5 5 CH_tar_176 5 8 0.00000000931391
Tripterygium wilfordii NC_052242.1 5 CH_twi_137 5 8 0.00000000950139
Tripterygium wilfordii NC_052247.1 5 CH_twi_233 5 19 0.00000194923
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_315 4 5 0.00000409745
Vitis vinifera chrUn 5 CH_vvi_332 4 4 0.000000560187
Vitis vinifera chr4 5 CH_vvi_333 4 4 0.000000560187
Zea mays 7 5 CH_zma_290 3 3 0.0000176281
Acer truncatum chr9 6 CH_acertr_503 3 3 0.0000406745
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 6 CH_arhy_545 4 4 0.000000355935
Arabidopsis thaliana Chr4 6 CH_ath_387 3 5 0.0000403107
Amborella trichopoda AmTr_v1.0_scaffold00040 6 CH_atr_209 4 5 0.000000153868
Beta vulgaris Chr1_EL10_PGA_scaffold3 6 CH_bvu_372 3 4 0.0000831864
Camellia sinensis var. sinensis Chr7 6 CH_camsi_134 8 15 0.0000000000000200647
Camellia sinensis var. sinensis Chr2 6 CH_camsi_207 8 26 0.00000000000479413
Camellia sinensis var. sinensis Chr7 6 CH_camsi_766 4 6 0.00000617226
Corylus avellana 2 6 CH_cav_367 4 8 0.00000622517
Corylus avellana 7 6 CH_cav_766 3 5 0.00068374
Carpinus fangiana Cfa07 6 CH_cfa_250 4 4 0.000000325702
Carya illinoinensis Chr11 6 CH_cil_201 6 8 0.0000000000573467
Carya illinoinensis Chr15 6 CH_cil_381 4 4 0.000000547617
Cucumis melo chr03 6 CH_cme_268 3 3 0.0000271037
Chenopodium quinoa C_Quinoa_Scaffold_3356 6 CH_cqu_966 3 4 0.000615716
Davidia involucrata GWHABJS00000011 6 CH_din_308 4 7 0.000000967572
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_186 5 10 0.00000000383438
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_485 3 3 0.0000254796
Eucalyptus grandis Chr11 6 CH_egr_1100 4 7 0.0000610793
Eucalyptus grandis Chr08 6 CH_egr_1377 3 3 0.000666782
Eucalyptus grandis Chr05 6 CH_egr_236 9 13 1.33126e-16
Eucalyptus grandis Chr04 6 CH_egr_426 6 6 0.0000000000117816
Eucalyptus grandis Chr06 6 CH_egr_580 5 5 0.00000000457445
Eucalyptus grandis Chr09 6 CH_egr_857 4 4 0.00000175623
Fragaria x ananassa Fvb1-4 6 CH_fan_726 4 10 0.0000326171
Fragaria vesca Fvb1 6 CH_fve_116 7 16 0.0000000000027467
Gossypium hirsutum A02 6 CH_ghi_612 4 5 0.00000204231
Glycine max Gm01 6 CH_gma_611 3 3 0.0001083
Gossypium raimondii Chr07 6 CH_gra_526 3 3 0.000163052
Helianthus annuus HanXRQChr14 6 CH_han_203 7 16 0.00000000000483941
Helianthus annuus HanXRQChr05 6 CH_han_262 5 5 0.000000000251228
Helianthus annuus HanXRQChr08 6 CH_han_602 5 19 0.00000287604
Lonicera japonica GWHAAZE00000040 6 CH_lonja_119 9 12 1.90248e-18
Lonicera japonica GWHAAZE00000004 6 CH_lonja_980 3 3 0.000246185
Lonicera japonica GWHAAZE00000004 6 CH_lonja_981 3 3 0.000246185
Lactuca sativa Lsat_1_v8_lg_8 6 CH_lsa_208 5 5 0.000000000399223
Magnolia biondii Chr12 6 CH_mbi_521 5 25 0.00000109758
Malus domestica Chr01 6 CH_mdo_119 8 15 0.0000000000000495854
Malus domestica Chr15 6 CH_mdo_342 5 6 0.00000000773955
Manihot esculenta Chromosome18 6 CH_mes_443 4 8 0.0000174721
Punica granatum NC_045132.1 6 CH_pgr_234 5 11 0.000000230774
Papaver somniferum NC_039363.1 6 CH_pso_557 4 7 0.000000668758
Papaver somniferum NC_039363.1 6 CH_pso_667 4 10 0.00000400612
Populus trichocarpa Chr07 6 CH_ptr_323 4 4 0.000000156846
Populus trichocarpa Chr05 6 CH_ptr_711 3 4 0.000442527
Quercus lobata 6 6 CH_qlo_134 12 27 5.08651e-22
Quercus lobata 11 6 CH_qlo_1533 3 3 0.000248686
Quercus lobata CM012294 6 CH_qlo_400 10 65 0.00000000000190574
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_1203 3 3 0.000235458
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_160 9 20 6.16209e-16
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_471 6 17 0.0000000120811
Salix brachista GWHAAZH00000011 6 CH_sbr_165 6 13 0.000000000872945
Simmondsia chinensis GWHAASQ00000015 6 CH_sci_255 3 3 0.0000488802
Sequoiadendron giganteum chr7 6 CH_sgi_1952 3 3 0.000121818
Solanum tuberosum ST4.03ch09 6 CH_stu_257 5 9 0.00000000427564
Solanum tuberosum ST4.03ch03 6 CH_stu_559 3 3 0.0000389195
Selenicereus undatus Scaffold_33679 6 CH_sun_156 3 3 0.0000392849
Trochodendron aralioides group5 6 CH_tar_176 5 8 0.00000000931391
Tripterygium wilfordii NC_052242.1 6 CH_twi_137 5 8 0.00000000950139
Tripterygium wilfordii NC_052247.1 6 CH_twi_233 5 19 0.00000194923
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_315 4 5 0.00000409745
Vitis vinifera chrUn 6 CH_vvi_332 4 4 0.000000560187
Vitis vinifera chr4 6 CH_vvi_333 4 4 0.000000560187
Zea mays 7 6 CH_zma_290 3 3 0.0000176281

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001