Functional clusters

Information

  • Type InterPro
  • Description Cas1p 10 TM acyl transferase domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_14 5 CH_amhyb_386 2 2 0.000505051
Brassica oleracea C4 5 CH_bol_779 2 2 0.000490292
Corylus avellana 1 5 CH_cav_778 2 3 0.000689981
Coffea canephora chr9 5 CH_ccan_300 2 8 0.0000127767
Carya illinoinensis Chr01 5 CH_cil_815 2 2 0.000619828
Davidia involucrata GWHABJS00000016 5 CH_din_741 2 2 0.000500125
Lotus japonicus chr4 5 CH_lja_471 2 2 0.000214523
Magnolia biondii Chr19 5 CH_mbi_570 3 7 0.00000247588
Olea europaea chr21 5 CH_oeu_671 2 2 0.000800683
Olea europaea chr16 5 CH_oeu_672 2 2 0.000800683
Physcomitrium patens Chr13 5 CH_ppa_312 2 2 0.000367636
Papaver somniferum NC_039366.1 5 CH_pso_1090 2 2 0.000337941
Quercus lobata 6 5 CH_qlo_1649 2 3 0.00046464
Striga asiatica scaffold1 5 CH_sas_201 2 2 0.000375223
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_707 2 2 0.000557543
Vanilla planifolia CM028154.1 5 CH_vpl_620 2 2 0.000443328
Vitis vinifera chr10 5 CH_vvi_250 3 3 0.0000000347148
Amaranthus hybridus AmaHy_arrow1_Scaffold_14 6 CH_amhyb_386 2 2 0.000505051
Brassica oleracea C4 6 CH_bol_779 2 2 0.000490292
Corylus avellana 1 6 CH_cav_778 2 3 0.000689981
Coffea canephora chr9 6 CH_ccan_300 2 8 0.0000127767
Carya illinoinensis Chr01 6 CH_cil_815 2 2 0.000619828
Davidia involucrata GWHABJS00000016 6 CH_din_741 2 2 0.000500125
Lotus japonicus chr4 6 CH_lja_471 2 2 0.000214523
Magnolia biondii Chr19 6 CH_mbi_570 3 7 0.00000247588
Olea europaea chr21 6 CH_oeu_671 2 2 0.000800683
Olea europaea chr16 6 CH_oeu_672 2 2 0.000800683
Physcomitrium patens Chr13 6 CH_ppa_312 2 2 0.000367636
Papaver somniferum NC_039366.1 6 CH_pso_1090 2 2 0.000337941
Quercus lobata 6 6 CH_qlo_1649 2 3 0.00046464
Striga asiatica scaffold1 6 CH_sas_201 2 2 0.000375223
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_707 2 2 0.000557543
Vanilla planifolia CM028154.1 6 CH_vpl_620 2 2 0.000443328
Vitis vinifera chr10 6 CH_vvi_250 3 3 0.0000000347148

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001