Functional clusters

Information

  • Type InterPro
  • Description L-lactate dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 5 CH_acertr_547 2 2 0.000070497
Camellia sinensis var. sinensis Chr14 5 CH_camsi_1270 2 3 0.000412677
Cannabis sativa NC_044374.1 5 CH_cansat_387 2 2 0.0000656642
Coffea canephora chr8 5 CH_ccan_610 2 14 0.000387551
Eutrema salsugineum scaffold_1 5 CH_esa_319 2 2 0.0000761499
Nelumbo nucifera chr6 5 CH_nnu_372 2 3 0.0000481684
Pisum sativum chr4LG4 5 CH_psa_652 2 3 0.000469451
Quercus lobata 12 5 CH_qlo_622 3 3 0.00000000399842
Salvia bowleyana GWHASIU00000002 5 CH_sbo_546 2 3 0.000136491
Sequoiadendron giganteum chr4 5 CH_sgi_1099 3 4 0.000000142385
Tripterygium wilfordii NC_052247.1 5 CH_twi_335 2 2 0.0000557507
Utricularia gibba unitig_0 5 CH_ugi_300 2 4 0.000492247
Zea mays 5 5 CH_zma_329 2 2 0.0000511313
Acer truncatum chr9 6 CH_acertr_547 2 2 0.000070497
Camellia sinensis var. sinensis Chr14 6 CH_camsi_1270 2 3 0.000412677
Cannabis sativa NC_044374.1 6 CH_cansat_387 2 2 0.0000656642
Coffea canephora chr8 6 CH_ccan_610 2 14 0.000387551
Eutrema salsugineum scaffold_1 6 CH_esa_319 2 2 0.0000761499
Nelumbo nucifera chr6 6 CH_nnu_372 2 3 0.0000481684
Pisum sativum chr4LG4 6 CH_psa_652 2 3 0.000469451
Quercus lobata 12 6 CH_qlo_622 3 3 0.00000000399842
Salvia bowleyana GWHASIU00000002 6 CH_sbo_546 2 3 0.000136491
Sequoiadendron giganteum chr4 6 CH_sgi_1099 3 4 0.000000142385
Tripterygium wilfordii NC_052247.1 6 CH_twi_335 2 2 0.0000557507
Utricularia gibba unitig_0 6 CH_ugi_300 2 4 0.000492247
Zea mays 5 6 CH_zma_329 2 2 0.0000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001