Functional clusters
Information
- Type InterPro
- Description Galactose mutarotase-like domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group26 | 5 | CH_ach_248 | 3 | 3 | 0.0000373404 |
| Brassica oleracea | C3 | 5 | CH_bol_622 | 5 | 63 | 0.0000995076 |
| Cicer arietinum L. | Ca_LG3_v3 | 5 | CH_car_167 | 3 | 3 | 0.0000208993 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_568 | 3 | 3 | 0.0000922496 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3489 | 5 | CH_cqu_794 | 3 | 4 | 0.000204324 |
| Helianthus annuus | HanXRQChr16 | 5 | CH_han_408 | 4 | 4 | 0.0000000366806 |
| Hydrangea macrophylla | Hma1.2p1_0577F.1 | 5 | CH_hma_250 | 3 | 3 | 0.0000481294 |
| Magnolia biondii | Chr12 | 5 | CH_mbi_815 | 4 | 15 | 0.000075849 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_1505 | 4 | 10 | 0.0000196061 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_224 | 10 | 24 | 3.3557e-19 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_393 | 3 | 3 | 0.0000582231 |
| Actinidia chinensis | Lachesis_group26 | 6 | CH_ach_248 | 3 | 3 | 0.0000373404 |
| Brassica oleracea | C3 | 6 | CH_bol_622 | 5 | 63 | 0.0000995076 |
| Cicer arietinum L. | Ca_LG3_v3 | 6 | CH_car_167 | 3 | 3 | 0.0000208993 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_568 | 3 | 3 | 0.0000922496 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3489 | 6 | CH_cqu_794 | 3 | 4 | 0.000204324 |
| Fragaria x ananassa | Fvb1-1 | 6 | CH_fan_151 | 6 | 10 | 0.000000000041278 |
| Helianthus annuus | HanXRQChr16 | 6 | CH_han_408 | 4 | 4 | 0.0000000366806 |
| Hydrangea macrophylla | Hma1.2p1_0577F.1 | 6 | CH_hma_250 | 3 | 3 | 0.0000481294 |
| Magnolia biondii | Chr12 | 6 | CH_mbi_815 | 4 | 15 | 0.000075849 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_1505 | 4 | 10 | 0.0000196061 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_224 | 10 | 24 | 3.3557e-19 |
| Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_393 | 3 | 3 | 0.0000582231 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |