Functional clusters

Information

  • Type InterPro
  • Description Ecd family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC01 5 CH_bca_278 3 3 0.000000000685435
Chlamydomonas reinhardtii chromosome_3 5 CH_cre_143 2 3 0.00034118
Davidia involucrata GWHABJS00000014 5 CH_din_459 2 2 0.0000500125
Sequoiadendron giganteum chr11 5 CH_sgi_1700 2 2 0.0000487151
Trochodendron aralioides group11 5 CH_tar_665 2 2 0.00018011
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_691 2 2 0.000454184
Vanilla planifolia CM028156.1 5 CH_vpl_286 3 21 0.0000108847
Vitis vinifera chrUn 5 CH_vvi_511 2 2 0.000076063
Brassica carinata ChrC01 6 CH_bca_278 3 3 0.000000000685435
Chlamydomonas reinhardtii chromosome_3 6 CH_cre_143 2 3 0.00034118
Davidia involucrata GWHABJS00000014 6 CH_din_459 2 2 0.0000500125
Sequoiadendron giganteum chr11 6 CH_sgi_1700 2 2 0.0000487151
Trochodendron aralioides group11 6 CH_tar_665 2 2 0.00018011
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_691 2 2 0.000454184
Vanilla planifolia CM028156.1 6 CH_vpl_286 3 21 0.0000108847
Vitis vinifera chrUn 6 CH_vvi_511 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001