Functional clusters
Information
- Type InterPro
- Description Pyrimidine 5-nucleotidase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-1 | 5 | CH_aar_431 | 2 | 2 | 0.000912326 |
| Arabidopsis lyrata | scaffold_8 | 5 | CH_aly_211 | 3 | 3 | 0.0000000653509 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_508 | 2 | 2 | 0.000286492 |
| Brassica carinata | ChrB08 | 5 | CH_bca_2117 | 2 | 2 | 0.000961939 |
| Carpinus fangiana | Cfa04 | 5 | CH_cfa_596 | 2 | 2 | 0.000757346 |
| Capsella rubella | scaffold_8 | 5 | CH_cru_257 | 3 | 3 | 0.000000280668 |
| Cucumis sativus L. | chr1 | 5 | CH_csa_205 | 3 | 3 | 0.000000365847 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_318 | 3 | 5 | 0.00000060398 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 5 | CH_lsa_810 | 2 | 2 | 0.000514007 |
| Prunus persica | Pp06 | 5 | CH_ppe_825 | 2 | 2 | 0.000745962 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_357 | 5 | 5 | 0.0000000000000106459 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_641 | 4 | 4 | 0.000000000072839 |
| Schrenkiella parvula | ch6-6 | 5 | CH_spa_120 | 3 | 3 | 0.000000325462 |
| Theobroma cacao | Chromosome_9 | 5 | CH_tca_740 | 2 | 2 | 0.000732386 |
| Aethionema arabicum | LG-1 | 6 | CH_aar_431 | 2 | 2 | 0.000912326 |
| Arabidopsis lyrata | scaffold_8 | 6 | CH_aly_211 | 3 | 3 | 0.0000000653509 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_508 | 2 | 2 | 0.000286492 |
| Brassica carinata | ChrB08 | 6 | CH_bca_2117 | 2 | 2 | 0.000961939 |
| Carpinus fangiana | Cfa04 | 6 | CH_cfa_596 | 2 | 2 | 0.000757346 |
| Cucumis melo | chr12 | 6 | CH_cme_172 | 3 | 3 | 0.000000233653 |
| Capsella rubella | scaffold_8 | 6 | CH_cru_257 | 3 | 3 | 0.000000280668 |
| Cucumis sativus L. | chr1 | 6 | CH_csa_205 | 3 | 3 | 0.000000365847 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_318 | 3 | 5 | 0.00000060398 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 6 | CH_lsa_810 | 2 | 2 | 0.000514007 |
| Prunus persica | Pp06 | 6 | CH_ppe_825 | 2 | 2 | 0.000745962 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_357 | 5 | 5 | 0.0000000000000106459 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_641 | 4 | 4 | 0.000000000072839 |
| Schrenkiella parvula | ch6-6 | 6 | CH_spa_120 | 3 | 3 | 0.000000325462 |
| Theobroma cacao | Chromosome_9 | 6 | CH_tca_740 | 2 | 2 | 0.000732386 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |