Functional clusters

Information

  • Type InterPro
  • Description Thioredoxin-like ferredoxin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 5 CH_acertr_892 2 2 0.000422982
Camellia sinensis var. sinensis Chr5 5 CH_camsi_798 3 8 0.00000988574
Davidia involucrata GWHABJS00000013 5 CH_din_229 3 3 0.0000000375197
Glycine max Gm08 5 CH_gma_448 3 6 0.00000362933
Lupinus albus Lalb_Chr15 5 CH_lal_770 2 2 0.000787236
Lotus japonicus Contig00272 5 CH_lja_340 3 10 0.0000183938
Magnolia biondii Chr14 5 CH_mbi_534 3 14 0.00000128752
Malus domestica Chr09 5 CH_mdo_1034 3 8 0.000137527
Malus domestica Chr09 5 CH_mdo_11 13 26 1.08321e-35
Medicago truncatula chr6 5 CH_mtr_327 4 6 0.000000000109229
Quercus lobata 8 5 CH_qlo_494 4 7 0.0000000000722455
Sequoiadendron giganteum chr2 5 CH_sgi_2080 2 2 0.000146145
Acer truncatum chr4 6 CH_acertr_892 2 2 0.000422982
Camellia sinensis var. sinensis Chr5 6 CH_camsi_798 3 8 0.00000988574
Davidia involucrata GWHABJS00000013 6 CH_din_229 3 3 0.0000000375197
Glycine max Gm08 6 CH_gma_448 3 6 0.00000362933
Lupinus albus Lalb_Chr15 6 CH_lal_770 2 2 0.000787236
Lotus japonicus Contig00272 6 CH_lja_340 3 10 0.0000183938
Magnolia biondii Chr14 6 CH_mbi_534 3 14 0.00000128752
Malus domestica Chr09 6 CH_mdo_1034 3 8 0.000137527
Malus domestica Chr09 6 CH_mdo_11 13 26 1.08321e-35
Medicago truncatula chr6 6 CH_mtr_327 4 6 0.000000000109229
Quercus lobata 8 6 CH_qlo_494 4 7 0.0000000000722455
Sequoiadendron giganteum chr2 6 CH_sgi_2080 2 2 0.000146145

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001