Functional clusters

Information

  • Type InterPro
  • Description Ferroportin-1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_25048_HRSCAF_25167 5 CH_ama_164 2 2 0.000258665
Brassica napus C04 5 CH_bna_1359 2 2 0.000519726
Brassica rapa A05 5 CH_bra_461 2 2 0.000257588
Chara braunii BFEA01000002 5 CH_cbr_344 2 5 0.000719192
Ceratophyllum demersum 7 5 CH_cde_416 2 2 0.000473878
Carya illinoinensis Chr09 5 CH_cil_783 2 3 0.000557817
Eucalyptus grandis Chr01 5 CH_egr_276 5 6 0.00000000000000316851
Glycine max Gm03 5 CH_gma_808 2 2 0.000379557
Lotus japonicus chr3 5 CH_lja_148 3 3 0.0000000306812
Manihot esculenta Chromosome09 5 CH_mes_583 2 2 0.000183189
Medicago truncatula chr4 5 CH_mtr_1072 2 2 0.000123259
Punica granatum NC_045127.1 5 CH_pgr_504 2 2 0.000225107
Papaver somniferum NW_020620492.1 5 CH_pso_1089 2 2 0.000337941
Populus trichocarpa Chr16 5 CH_ptr_686 2 2 0.000346801
Phaseolus vulgaris Chr10 5 CH_pvu_539 2 2 0.000220418
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_491 3 3 0.0000000238391
Sechium edule LG14 5 CH_sed_457 2 2 0.000428052
Sequoiadendron giganteum chr1 5 CH_sgi_2078 2 2 0.000146145
Theobroma cacao Chromosome_5 5 CH_tca_616 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG4 5 CH_tpr_602 2 2 0.000227092
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_600 2 2 0.000278772
Vigna mungo CM024078.1 5 CH_vmu_444 2 2 0.000193842
Vitis vinifera chr8 5 CH_vvi_736 2 3 0.000684523
Zea mays 9 5 CH_zma_439 2 2 0.000306788
Avicennia marina ScioBoG_25048_HRSCAF_25167 6 CH_ama_164 2 2 0.000258665
Brassica napus C04 6 CH_bna_1359 2 2 0.000519726
Brassica rapa A05 6 CH_bra_461 2 2 0.000257588
Chara braunii BFEA01000002 6 CH_cbr_344 2 5 0.000719192
Ceratophyllum demersum 7 6 CH_cde_416 2 2 0.000473878
Carya illinoinensis Chr09 6 CH_cil_783 2 3 0.000557817
Eucalyptus grandis Chr01 6 CH_egr_276 5 6 0.00000000000000316851
Glycine max Gm03 6 CH_gma_808 2 2 0.000379557
Lotus japonicus chr3 6 CH_lja_148 3 3 0.0000000306812
Manihot esculenta Chromosome09 6 CH_mes_583 2 2 0.000183189
Medicago truncatula chr4 6 CH_mtr_1072 2 2 0.000123259
Punica granatum NC_045127.1 6 CH_pgr_504 2 2 0.000225107
Papaver somniferum NW_020620492.1 6 CH_pso_1089 2 2 0.000337941
Populus trichocarpa Chr16 6 CH_ptr_686 2 2 0.000346801
Phaseolus vulgaris Chr10 6 CH_pvu_539 2 2 0.000220418
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_491 3 3 0.0000000238391
Sechium edule LG14 6 CH_sed_457 2 2 0.000428052
Sequoiadendron giganteum chr1 6 CH_sgi_2078 2 2 0.000146145
Theobroma cacao Chromosome_5 6 CH_tca_616 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG4 6 CH_tpr_602 2 2 0.000227092
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_600 2 2 0.000278772
Vigna mungo CM024078.1 6 CH_vmu_444 2 2 0.000193842
Vitis vinifera chr8 6 CH_vvi_736 2 3 0.000684523
Zea mays 9 6 CH_zma_439 2 2 0.000306788

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001