Functional clusters
Information
- Type InterPro
- Description Transmembrane protein GPR107/GPR108-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB01 | 5 | CH_bca_276 | 5 | 17 | 0.00000000063598 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_720 | 4 | 13 | 0.000000141678 |
| Gossypium hirsutum | A11 | 5 | CH_ghi_707 | 3 | 3 | 0.0000105664 |
| Gossypium hirsutum | D11 | 5 | CH_ghi_708 | 3 | 3 | 0.0000105664 |
| Gossypium raimondii | Chr07 | 5 | CH_gra_332 | 3 | 3 | 0.000003518 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_186 | 5 | 7 | 0.00000000000153363 |
| Hydrangea macrophylla | Hma1.2p1_0350F.1 | 5 | CH_hma_206 | 3 | 4 | 0.0000062179 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_122 | 7 | 18 | 0.000000000000308684 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 5 | CH_lsa_640 | 3 | 4 | 0.000103688 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_888 | 3 | 7 | 0.000905526 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_1226 | 3 | 3 | 0.000000587373 |
| Zea mays | 1 | 5 | CH_zma_246 | 3 | 3 | 0.00000447075 |
| Brassica carinata | ChrB01 | 6 | CH_bca_276 | 5 | 17 | 0.00000000063598 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_720 | 4 | 13 | 0.000000141678 |
| Gossypium hirsutum | A11 | 6 | CH_ghi_707 | 3 | 3 | 0.0000105664 |
| Gossypium hirsutum | D11 | 6 | CH_ghi_708 | 3 | 3 | 0.0000105664 |
| Gossypium raimondii | Chr07 | 6 | CH_gra_332 | 3 | 3 | 0.000003518 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_186 | 5 | 7 | 0.00000000000153363 |
| Hydrangea macrophylla | Hma1.2p1_0350F.1 | 6 | CH_hma_206 | 3 | 4 | 0.0000062179 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_122 | 7 | 18 | 0.000000000000308684 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 6 | CH_lsa_640 | 3 | 4 | 0.000103688 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_888 | 3 | 7 | 0.000905526 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_1226 | 3 | 3 | 0.000000587373 |
| Zea mays | 1 | 6 | CH_zma_246 | 3 | 3 | 0.00000447075 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |