Functional clusters

Information

  • Type InterPro
  • Description Solute carrier family 35 member SLC35F1/F2/F6

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_5 5 CH_aly_528 2 2 0.000198013
Aquilegia oxysepala CHR04 5 CH_aox_141 3 3 0.0000000964818
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 5 CH_arhy_509 3 3 0.000000161337
Arabidopsis thaliana Chr3 5 CH_ath_72 4 4 0.000000000000352734
Brassica napus C06 5 CH_bna_778 3 10 0.00000743901
Brassica oleracea C6 5 CH_bol_536 3 12 0.0000422698
Camellia sinensis var. sinensis Chr4 5 CH_camsi_1497 2 3 0.000825341
Capsicum annuum PGAv.1.6.scaffold397 5 CH_can_782 2 2 0.000495663
Corylus avellana 1 5 CH_cav_731 2 2 0.000460017
Citrus clementina scaffold_6 5 CH_ccl_298 3 3 0.000000100941
Cardamine hirsuta Chr5 5 CH_chi_114 4 4 0.000000000004954
Chenopodium quinoa C_Quinoa_Scaffold_3100 5 CH_cqu_746 2 2 0.000142146
Capsella rubella scaffold_5 5 CH_cru_203 3 3 0.0000000320764
Davidia involucrata GWHABJS00000015 5 CH_din_553 2 2 0.000150038
Eutrema salsugineum scaffold_19 5 CH_esa_409 2 2 0.00022845
Helianthus annuus HanXRQChr11 5 CH_han_312 4 7 0.0000000019988
Magnolia biondii Chr10 5 CH_mbi_919 2 2 0.000145698
Medicago truncatula chr7 5 CH_mtr_1281 2 2 0.000410863
Nelumbo nucifera chr1 5 CH_nnu_558 2 2 0.000481684
Oryza sativa ssp. japonica chr05 5 CH_osa_748 2 2 0.000792184
Punica granatum NC_045128.1 5 CH_pgr_503 2 2 0.000225107
Papaver somniferum NC_039366.1 5 CH_pso_626 3 8 0.00000238701
Quercus lobata 7 5 CH_qlo_1583 2 2 0.000309773
Sequoiadendron giganteum chr8 5 CH_sgi_2075 2 2 0.000146145
Solanum lycopersicum SL4.0ch09 5 CH_sly_806 2 2 0.000352164
Selaginella moellendorffii scaffold_0 5 CH_smo_325 2 2 0.000560224
Schrenkiella parvula ch5-1 5 CH_spa_290 2 2 0.000236202
Solanum pennellii Spenn-ch09 5 CH_spe_723 2 2 0.000266874
Solanum tuberosum ST4.03ch09 5 CH_stu_784 2 2 0.000307472
Vitis vinifera chr8 5 CH_vvi_293 3 3 0.000000173574
Arabidopsis lyrata scaffold_5 6 CH_aly_528 2 2 0.000198013
Aquilegia oxysepala CHR04 6 CH_aox_141 3 3 0.0000000964818
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 6 CH_arhy_509 3 3 0.000000161337
Arabidopsis thaliana Chr3 6 CH_ath_72 4 4 0.000000000000352734
Brassica napus C06 6 CH_bna_778 3 10 0.00000743901
Brassica oleracea C6 6 CH_bol_536 3 12 0.0000422698
Camellia sinensis var. sinensis Chr4 6 CH_camsi_1497 2 3 0.000825341
Capsicum annuum PGAv.1.6.scaffold397 6 CH_can_782 2 2 0.000495663
Corylus avellana 1 6 CH_cav_731 2 2 0.000460017
Citrus clementina scaffold_6 6 CH_ccl_298 3 3 0.000000100941
Cardamine hirsuta Chr5 6 CH_chi_114 4 4 0.000000000004954
Chenopodium quinoa C_Quinoa_Scaffold_3100 6 CH_cqu_746 2 2 0.000142146
Capsella rubella scaffold_5 6 CH_cru_203 3 3 0.0000000320764
Davidia involucrata GWHABJS00000015 6 CH_din_553 2 2 0.000150038
Eutrema salsugineum scaffold_19 6 CH_esa_409 2 2 0.00022845
Helianthus annuus HanXRQChr11 6 CH_han_312 4 7 0.0000000019988
Magnolia biondii Chr10 6 CH_mbi_919 2 2 0.000145698
Medicago truncatula chr7 6 CH_mtr_1281 2 2 0.000410863
Nelumbo nucifera chr1 6 CH_nnu_558 2 2 0.000481684
Oryza sativa ssp. japonica chr05 6 CH_osa_748 2 2 0.000792184
Punica granatum NC_045128.1 6 CH_pgr_503 2 2 0.000225107
Papaver somniferum NC_039366.1 6 CH_pso_626 3 8 0.00000238701
Quercus lobata 7 6 CH_qlo_1583 2 2 0.000309773
Sequoiadendron giganteum chr8 6 CH_sgi_2075 2 2 0.000146145
Solanum lycopersicum SL4.0ch09 6 CH_sly_806 2 2 0.000352164
Selaginella moellendorffii scaffold_0 6 CH_smo_325 2 2 0.000560224
Schrenkiella parvula ch5-1 6 CH_spa_290 2 2 0.000236202
Solanum pennellii Spenn-ch09 6 CH_spe_723 2 2 0.000266874
Solanum tuberosum ST4.03ch09 6 CH_stu_784 2 2 0.000307472
Vitis vinifera chr8 6 CH_vvi_293 3 3 0.000000173574

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001