Functional clusters
Information
- Type InterPro
- Description RIN4, pathogenic type III effector avirulence factor Avr cleavage site
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Papaver somniferum | NC_039364.1 | 5 | CH_pso_947 | 3 | 15 | 0.00012594 |
| Selenicereus undatus | Scaffold_19641 | 5 | CH_sun_386 | 2 | 2 | 0.000726639 |
| Papaver somniferum | NC_039364.1 | 6 | CH_pso_947 | 3 | 15 | 0.00012594 |
| Selenicereus undatus | Scaffold_19641 | 6 | CH_sun_386 | 2 | 2 | 0.000726639 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |