Functional clusters

Information

  • Type InterPro
  • Description Transport and Golgi organisation protein 2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 5 CH_aly_40 9 80 2.58501e-17
Avicennia marina ScioBoG_4088_HRSCAF_4107 5 CH_ama_192 2 2 0.000517331
Aquilegia oxysepala CHR06 5 CH_aox_529 2 3 0.000721742
Arabidopsis thaliana Chr1 5 CH_ath_295 3 17 0.00000334764
Amborella trichopoda AmTr_v1.0_scaffold00044 5 CH_atr_388 2 2 0.0000794407
Camellia sinensis var. sinensis Chr2 5 CH_camsi_929 2 2 0.0000458547
Coffea canephora chr11 5 CH_ccan_705 2 21 0.000809161
Carica papaya supercontig_26 5 CH_cpa_569 2 2 0.000570396
Capsella rubella scaffold_4 5 CH_cru_165 4 4 0.00000000213436
Capsella rubella scaffold_1 5 CH_cru_341 3 4 0.00000449069
Eucalyptus grandis Chr09 5 CH_egr_395 4 4 0.00000000000300752
Eutrema salsugineum scaffold_5 5 CH_esa_457 2 2 0.000456899
Fragaria vesca Fvb2 5 CH_fve_639 2 2 0.00017673
Gossypium hirsutum A01 5 CH_ghi_1210 2 2 0.000560733
Gossypium hirsutum D01 5 CH_ghi_520 3 5 0.000000374276
Gossypium raimondii Chr02 5 CH_gra_230 3 3 0.0000000431127
Lonicera japonica GWHAAZE00000004 5 CH_lonja_1121 2 3 0.00053896
Punica granatum NC_045128.1 5 CH_pgr_502 2 2 0.000225107
Schrenkiella parvula ch1-1 5 CH_spa_58 4 4 0.000000000483251
Arabidopsis lyrata scaffold_1 6 CH_aly_40 9 80 2.58501e-17
Avicennia marina ScioBoG_4088_HRSCAF_4107 6 CH_ama_192 2 2 0.000517331
Aquilegia oxysepala CHR06 6 CH_aox_529 2 3 0.000721742
Arabidopsis thaliana Chr1 6 CH_ath_295 3 17 0.00000334764
Amborella trichopoda AmTr_v1.0_scaffold00044 6 CH_atr_388 2 2 0.0000794407
Camellia sinensis var. sinensis Chr2 6 CH_camsi_929 2 2 0.0000458547
Coffea canephora chr11 6 CH_ccan_705 2 21 0.000809161
Carica papaya supercontig_26 6 CH_cpa_569 2 2 0.000570396
Capsella rubella scaffold_4 6 CH_cru_165 4 4 0.00000000213436
Capsella rubella scaffold_1 6 CH_cru_341 3 4 0.00000449069
Eucalyptus grandis Chr09 6 CH_egr_395 4 4 0.00000000000300752
Eutrema salsugineum scaffold_5 6 CH_esa_457 2 2 0.000456899
Fragaria x ananassa Fvb2-4 6 CH_fan_1077 2 2 0.000518101
Fragaria x ananassa Fvb2-1 6 CH_fan_1078 2 2 0.000518101
Fragaria vesca Fvb2 6 CH_fve_639 2 2 0.00017673
Gossypium hirsutum A01 6 CH_ghi_1210 2 2 0.000560733
Gossypium hirsutum D01 6 CH_ghi_520 3 5 0.000000374276
Gossypium raimondii Chr02 6 CH_gra_230 3 3 0.0000000431127
Lonicera japonica GWHAAZE00000004 6 CH_lonja_1121 2 3 0.00053896
Punica granatum NC_045128.1 6 CH_pgr_502 2 2 0.000225107
Schrenkiella parvula ch1-1 6 CH_spa_58 4 4 0.000000000483251

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001