Functional clusters

Information

  • Type InterPro
  • Description Cytoplasmic FMR1-interacting

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group17 5 CH_ach_265 2 2 0.0000543213
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 5 CH_amhyb_358 2 4 0.000505008
Amborella trichopoda AmTr_v1.0_scaffold00039 5 CH_atr_386 2 2 0.0000794407
Brassica napus A03 5 CH_bna_1265 2 3 0.000334099
Brassica rapa A03 5 CH_bra_384 2 3 0.000128791
Capsicum annuum PGAv.1.6.scaffold61 5 CH_can_237 3 3 0.0000000102372
Chara braunii BFEA01000258 5 CH_cbr_239 2 3 0.000215773
Coffea canephora chr10 5 CH_ccan_684 2 19 0.000651591
Ceratophyllum demersum 11 5 CH_cde_321 2 2 0.000236939
Citrullus lanatus CG_Chr03 5 CH_cla_213 2 4 0.0000887115
Carica papaya supercontig_51 5 CH_cpa_635 2 5 0.000950525
Cucumis sativus L. chr1 5 CH_csa_339 2 2 0.0000834759
Daucus carota DCARv2_Chr2 5 CH_dca_415 2 2 0.0000637775
Gossypium hirsutum D11 5 CH_ghi_956 2 2 0.000160209
Gossypium raimondii Chr07 5 CH_gra_505 2 2 0.000160832
Lupinus albus Lalb_Chr18 5 CH_lal_400 2 2 0.0000524824
Lonicera japonica GWHAAZE00000002 5 CH_lonja_154 5 7 0.00000000000000202616
Malus domestica Chr12 5 CH_mdo_920 2 3 0.000113761
Petunia axillaris Peaxi162Scf00285 5 CH_pax_420 2 2 0.0000703556
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_971 2 2 0.0000398653
Sequoiadendron giganteum chr7 5 CH_sgi_303 5 6 2.53467e-16
Sapria himalayana scaffold14_12630789 5 CH_shi_139 3 10 0.0000000980824
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_175 3 4 0.000000051809
Vanilla planifolia CM028155.1 5 CH_vpl_47 4 5 0.00000000000605125
Actinidia chinensis Lachesis_group17 6 CH_ach_265 2 2 0.0000543213
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 6 CH_amhyb_358 2 4 0.000505008
Amborella trichopoda AmTr_v1.0_scaffold00039 6 CH_atr_386 2 2 0.0000794407
Brassica napus A03 6 CH_bna_1265 2 3 0.000334099
Brassica rapa A03 6 CH_bra_384 2 3 0.000128791
Capsicum annuum PGAv.1.6.scaffold61 6 CH_can_237 3 3 0.0000000102372
Chara braunii BFEA01000258 6 CH_cbr_239 2 3 0.000215773
Coffea canephora chr10 6 CH_ccan_684 2 19 0.000651591
Ceratophyllum demersum 11 6 CH_cde_321 2 2 0.000236939
Citrullus lanatus CG_Chr03 6 CH_cla_213 2 4 0.0000887115
Carica papaya supercontig_51 6 CH_cpa_635 2 5 0.000950525
Cucumis sativus L. chr1 6 CH_csa_339 2 2 0.0000834759
Daucus carota DCARv2_Chr2 6 CH_dca_415 2 2 0.0000637775
Gossypium hirsutum D11 6 CH_ghi_956 2 2 0.000160209
Gossypium raimondii Chr07 6 CH_gra_505 2 2 0.000160832
Lupinus albus Lalb_Chr18 6 CH_lal_400 2 2 0.0000524824
Lonicera japonica GWHAAZE00000002 6 CH_lonja_154 5 7 0.00000000000000202616
Malus domestica Chr12 6 CH_mdo_920 2 3 0.000113761
Petunia axillaris Peaxi162Scf00285 6 CH_pax_420 2 2 0.0000703556
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_971 2 2 0.0000398653
Sequoiadendron giganteum chr7 6 CH_sgi_303 5 6 2.53467e-16
Sapria himalayana scaffold14_12630789 6 CH_shi_139 3 10 0.0000000980824
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_175 3 4 0.000000051809
Vanilla planifolia CM028155.1 6 CH_vpl_47 4 5 0.00000000000605125

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001