Functional clusters
Information
- Type InterPro
- Description Choline transporter-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 5 | CH_arhy_1262 | 3 | 11 | 0.000647402 |
| Brassica carinata | ChrC04 | 5 | CH_bca_775 | 3 | 3 | 0.00000121391 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_381 | 4 | 6 | 0.0000000103215 |
| Coffea canephora | chr5 | 5 | CH_ccan_607 | 2 | 4 | 0.000383296 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_297 | 3 | 3 | 0.00000148572 |
| Quercus lobata | 8 | 5 | CH_qlo_1779 | 2 | 2 | 0.000774433 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1078 | 3 | 3 | 0.000000124594 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 6 | CH_arhy_1262 | 3 | 11 | 0.000647402 |
| Brassica carinata | ChrC04 | 6 | CH_bca_775 | 3 | 3 | 0.00000121391 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_381 | 4 | 6 | 0.0000000103215 |
| Coffea canephora | chr5 | 6 | CH_ccan_607 | 2 | 4 | 0.000383296 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_297 | 3 | 3 | 0.00000148572 |
| Quercus lobata | 8 | 6 | CH_qlo_1779 | 2 | 2 | 0.000774433 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1078 | 3 | 3 | 0.000000124594 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |