Functional clusters

Information

  • Type InterPro
  • Description Trafficking protein particle complex subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB07 5 CH_bca_1894 2 2 0.00059854
Camellia sinensis var. sinensis Chr3 5 CH_camsi_781 3 10 0.00000756579
Carya illinoinensis Chr07 5 CH_cil_461 3 7 0.00000403246
Daucus carota DCARv2_Chr6 5 CH_dca_599 2 2 0.000382665
Eucalyptus grandis Chr08 5 CH_egr_1339 3 33 0.000559098
Erythranthe guttata scaffold_6 5 CH_egut_349 3 6 0.00000159022
Rhododendron simsii chr09 5 CH_rsi_931 2 3 0.000580745
Salix brachista GWHAAZH00000017 5 CH_sbr_533 2 2 0.000189042
Vitis vinifera chr14 5 CH_vvi_232 4 11 0.0000000152363
Brassica carinata ChrB07 6 CH_bca_1894 2 2 0.00059854
Camellia sinensis var. sinensis Chr3 6 CH_camsi_781 3 10 0.00000756579
Carya illinoinensis Chr07 6 CH_cil_461 3 7 0.00000403246
Daucus carota DCARv2_Chr6 6 CH_dca_599 2 2 0.000382665
Eucalyptus grandis Chr08 6 CH_egr_1339 3 33 0.000559098
Erythranthe guttata scaffold_6 6 CH_egut_349 3 6 0.00000159022
Rhododendron simsii chr09 6 CH_rsi_931 2 3 0.000580745
Salix brachista GWHAAZH00000017 6 CH_sbr_533 2 2 0.000189042
Vitis vinifera chr14 6 CH_vvi_232 4 11 0.0000000152363

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001