Functional clusters
Information
- Type InterPro
- Description RAB6-interacting golgin
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 5 | CH_arhy_1236 | 2 | 2 | 0.000628705 |
| Brassica carinata | ChrB01 | 5 | CH_bca_1034 | 3 | 4 | 0.00000898004 |
| Brassica carinata | ChrC02 | 5 | CH_bca_1152 | 3 | 5 | 0.0000224454 |
| Capsella rubella | scaffold_4 | 5 | CH_cru_407 | 3 | 9 | 0.0000376825 |
| Eucalyptus grandis | Chr09 | 5 | CH_egr_976 | 3 | 8 | 0.0000161026 |
| Quercus lobata | 4 | 5 | CH_qlo_1838 | 2 | 3 | 0.000929264 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 6 | CH_arhy_1236 | 2 | 2 | 0.000628705 |
| Brassica carinata | ChrB01 | 6 | CH_bca_1034 | 3 | 4 | 0.00000898004 |
| Brassica carinata | ChrC02 | 6 | CH_bca_1152 | 3 | 5 | 0.0000224454 |
| Capsella rubella | scaffold_4 | 6 | CH_cru_407 | 3 | 9 | 0.0000376825 |
| Eucalyptus grandis | Chr09 | 6 | CH_egr_976 | 3 | 8 | 0.0000161026 |
| Quercus lobata | 4 | 6 | CH_qlo_1838 | 2 | 3 | 0.000929264 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |