Functional clusters

Information

  • Type InterPro
  • Description tRNA-splicing endonuclease

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr3 5 CH_ath_648 2 5 0.000859414
Brassica oleracea C3 5 CH_bol_651 2 4 0.00019611
Camellia sinensis var. sinensis Chr11 5 CH_camsi_501 3 7 0.000000110382
Daucus carota DCARv2_Chr2 5 CH_dca_731 2 6 0.000956541
Erythranthe guttata scaffold_9 5 CH_egut_68 7 21 1.09139e-17
Malus domestica Chr11 5 CH_mdo_1376 2 7 0.000796269
Rhododendron simsii chr13 5 CH_rsi_861 2 4 0.000387159
Salix brachista GWHAAZH00000009 5 CH_sbr_386 3 23 0.000010542
Solanum tuberosum ST4.03ch06 5 CH_stu_389 3 11 0.000000649837
Arabidopsis thaliana Chr3 6 CH_ath_648 2 5 0.000859414
Brassica oleracea C3 6 CH_bol_651 2 4 0.00019611
Camellia sinensis var. sinensis Chr11 6 CH_camsi_501 3 7 0.000000110382
Daucus carota DCARv2_Chr2 6 CH_dca_731 2 6 0.000956541
Erythranthe guttata scaffold_9 6 CH_egut_68 7 21 1.09139e-17
Malus domestica Chr11 6 CH_mdo_1376 2 7 0.000796269
Rhododendron simsii chr13 6 CH_rsi_861 2 4 0.000387159
Salix brachista GWHAAZH00000009 6 CH_sbr_386 3 23 0.000010542
Solanum tuberosum ST4.03ch06 6 CH_stu_389 3 11 0.000000649837

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001