Functional clusters
Information
- Type InterPro
- Description UMP-CMP kinase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Avicennia marina | ScioBoG_102838_HRSCAF_103081 | 5 | CH_ama_187 | 2 | 2 | 0.000517331 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 5 | CH_amhyb_356 | 2 | 4 | 0.000505008 |
Camellia sinensis var. sinensis | Chr7 | 5 | CH_camsi_1268 | 2 | 3 | 0.000412677 |
Eucalyptus grandis | Chr04 | 5 | CH_egr_1348 | 2 | 3 | 0.000585274 |
Sequoiadendron giganteum | HRSCAF_1 | 5 | CH_sgi_2002 | 2 | 2 | 0.000146145 |
Trochodendron aralioides | group12 | 5 | CH_tar_860 | 2 | 2 | 0.000600366 |
Avicennia marina | ScioBoG_102838_HRSCAF_103081 | 6 | CH_ama_187 | 2 | 2 | 0.000517331 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 6 | CH_amhyb_356 | 2 | 4 | 0.000505008 |
Camellia sinensis var. sinensis | Chr7 | 6 | CH_camsi_1268 | 2 | 3 | 0.000412677 |
Eucalyptus grandis | Chr04 | 6 | CH_egr_1348 | 2 | 3 | 0.000585274 |
Sequoiadendron giganteum | HRSCAF_1 | 6 | CH_sgi_2002 | 2 | 2 | 0.000146145 |
Trochodendron aralioides | group12 | 6 | CH_tar_860 | 2 | 2 | 0.000600366 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |