Functional clusters
Information
- Type InterPro
- Description Heavy metal-associated domain, HMA
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR06 | 5 | CH_aox_381 | 3 | 3 | 0.000177758 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 5 | CH_arhy_642 | 4 | 4 | 0.00000146228 |
| Amborella trichopoda | AmTr_v1.0_scaffold00076 | 5 | CH_atr_438 | 3 | 4 | 0.000138251 |
| Amborella trichopoda | AmTr_v1.0_scaffold00018 | 5 | CH_atr_609 | 3 | 6 | 0.000690132 |
| Brassica carinata | ChrB07 | 5 | CH_bca_1769 | 3 | 3 | 0.000442075 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 5 | CH_bvu_186 | 4 | 4 | 0.000000172432 |
| Camellia sinensis var. sinensis | Chr10 | 5 | CH_camsi_1029 | 3 | 3 | 0.000131411 |
| Capsicum annuum | PGAv.1.6.scaffold1013 | 5 | CH_can_507 | 4 | 9 | 0.0000377384 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_669 | 3 | 3 | 0.000264818 |
| Carpinus fangiana | Cfa03 | 5 | CH_cfa_529 | 3 | 4 | 0.000366462 |
| Davidia involucrata | GWHABJS00000004 | 5 | CH_din_431 | 4 | 7 | 0.0000290914 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_213 | 14 | 80 | 2.28965e-17 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_744 | 6 | 18 | 0.000000227431 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_861 | 4 | 4 | 0.00000183429 |
| Eucalyptus grandis | scaffold_13 | 5 | CH_egr_893 | 6 | 27 | 0.00000355414 |
| Fragaria vesca | Fvb4 | 5 | CH_fve_579 | 3 | 3 | 0.000102033 |
| Glycine max | Gm16 | 5 | CH_gma_600 | 4 | 7 | 0.0000849747 |
| Hydrangea macrophylla | Hma1.2p1_0270F.1 | 5 | CH_hma_503 | 3 | 3 | 0.000332427 |
| Lotus japonicus | chr2 | 5 | CH_lja_352 | 4 | 6 | 0.0000246171 |
| Magnolia biondii | Chr16 | 5 | CH_mbi_1182 | 3 | 4 | 0.000677161 |
| Malus domestica | Chr01 | 5 | CH_mdo_1158 | 3 | 3 | 0.00029857 |
| Marchantia polymorpha | scaffold_22 | 5 | CH_mpo_222 | 3 | 4 | 0.000838807 |
| Marchantia polymorpha | scaffold_180 | 5 | CH_mpo_25 | 7 | 10 | 0.000000000000460619 |
| Marchantia polymorpha | scaffold_26 | 5 | CH_mpo_95 | 4 | 5 | 0.0000022582 |
| Medicago truncatula | chr1 | 5 | CH_mtr_636 | 4 | 4 | 0.000000508065 |
| Oryza sativa ssp. japonica | chr02 | 5 | CH_osa_734 | 3 | 4 | 0.000632171 |
| Punica granatum | NC_045132.1 | 5 | CH_pgr_451 | 4 | 8 | 0.000125427 |
| Punica granatum | NC_045133.1 | 5 | CH_pgr_582 | 3 | 3 | 0.000642526 |
| Physcomitrium patens | Chr01 | 5 | CH_ppa_3 | 9 | 12 | 3.91503e-17 |
| Papaver somniferum | NC_039365.1 | 5 | CH_pso_1274 | 3 | 4 | 0.00087615 |
| Papaver somniferum | NC_039365.1 | 5 | CH_pso_16 | 15 | 32 | 2.07802e-30 |
| Papaver somniferum | NC_039361.1 | 5 | CH_pso_19 | 14 | 28 | 1.22644e-28 |
| Populus trichocarpa | Chr17 | 5 | CH_ptr_247 | 5 | 5 | 0.00000000697354 |
| Phaseolus vulgaris | Chr07 | 5 | CH_pvu_357 | 4 | 5 | 0.00000761726 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_796 | 4 | 7 | 0.00000370067 |
| Rhododendron simsii | chr13 | 5 | CH_rsi_341 | 6 | 15 | 0.0000000135817 |
| Rhododendron simsii | chr03 | 5 | CH_rsi_851 | 3 | 3 | 0.000313051 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_1141 | 4 | 4 | 0.000000206608 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_1526 | 4 | 9 | 0.0000258801 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_254 | 8 | 9 | 7.14382e-18 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_566 | 6 | 8 | 0.0000000000117185 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_744 | 5 | 6 | 0.00000000177948 |
| Selaginella moellendorffii | scaffold_11 | 5 | CH_smo_198 | 3 | 3 | 0.0000648656 |
| Selenicereus undatus | Scaffold_33679 | 5 | CH_sun_226 | 3 | 3 | 0.00013699 |
| Vitis vinifera | chr16 | 5 | CH_vvi_208 | 5 | 6 | 0.00000000431679 |
| Aquilegia oxysepala | CHR06 | 6 | CH_aox_381 | 3 | 3 | 0.000177758 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 6 | CH_arhy_642 | 4 | 4 | 0.00000146228 |
| Amborella trichopoda | AmTr_v1.0_scaffold00076 | 6 | CH_atr_438 | 3 | 4 | 0.000138251 |
| Amborella trichopoda | AmTr_v1.0_scaffold00018 | 6 | CH_atr_609 | 3 | 6 | 0.000690132 |
| Brassica carinata | ChrB07 | 6 | CH_bca_1769 | 3 | 3 | 0.000442075 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 6 | CH_bvu_186 | 4 | 4 | 0.000000172432 |
| Camellia sinensis var. sinensis | Chr10 | 6 | CH_camsi_1029 | 3 | 3 | 0.000131411 |
| Capsicum annuum | PGAv.1.6.scaffold1013 | 6 | CH_can_507 | 4 | 9 | 0.0000377384 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_669 | 3 | 3 | 0.000264818 |
| Carpinus fangiana | Cfa03 | 6 | CH_cfa_529 | 3 | 4 | 0.000366462 |
| Davidia involucrata | GWHABJS00000004 | 6 | CH_din_431 | 4 | 7 | 0.0000290914 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_213 | 14 | 80 | 2.28965e-17 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_744 | 6 | 18 | 0.000000227431 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_861 | 4 | 4 | 0.00000183429 |
| Eucalyptus grandis | scaffold_13 | 6 | CH_egr_893 | 6 | 27 | 0.00000355414 |
| Fragaria vesca | Fvb4 | 6 | CH_fve_579 | 3 | 3 | 0.000102033 |
| Glycine max | Gm16 | 6 | CH_gma_600 | 4 | 7 | 0.0000849747 |
| Hydrangea macrophylla | Hma1.2p1_0270F.1 | 6 | CH_hma_503 | 3 | 3 | 0.000332427 |
| Lotus japonicus | chr2 | 6 | CH_lja_352 | 4 | 6 | 0.0000246171 |
| Magnolia biondii | Chr16 | 6 | CH_mbi_1182 | 3 | 4 | 0.000677161 |
| Malus domestica | Chr01 | 6 | CH_mdo_1158 | 3 | 3 | 0.00029857 |
| Marchantia polymorpha | scaffold_22 | 6 | CH_mpo_222 | 3 | 4 | 0.000838807 |
| Marchantia polymorpha | scaffold_180 | 6 | CH_mpo_25 | 7 | 10 | 0.000000000000460619 |
| Marchantia polymorpha | scaffold_26 | 6 | CH_mpo_95 | 4 | 5 | 0.0000022582 |
| Medicago truncatula | chr1 | 6 | CH_mtr_636 | 4 | 4 | 0.000000508065 |
| Oryza sativa ssp. japonica | chr02 | 6 | CH_osa_734 | 3 | 4 | 0.000632171 |
| Punica granatum | NC_045132.1 | 6 | CH_pgr_451 | 4 | 8 | 0.000125427 |
| Punica granatum | NC_045133.1 | 6 | CH_pgr_582 | 3 | 3 | 0.000642526 |
| Physcomitrium patens | Chr01 | 6 | CH_ppa_3 | 9 | 12 | 3.91503e-17 |
| Papaver somniferum | NC_039365.1 | 6 | CH_pso_1274 | 3 | 4 | 0.00087615 |
| Papaver somniferum | NC_039365.1 | 6 | CH_pso_16 | 15 | 32 | 2.07802e-30 |
| Papaver somniferum | NC_039361.1 | 6 | CH_pso_19 | 14 | 28 | 1.22644e-28 |
| Populus trichocarpa | Chr17 | 6 | CH_ptr_247 | 5 | 5 | 0.00000000697354 |
| Phaseolus vulgaris | Chr07 | 6 | CH_pvu_357 | 4 | 5 | 0.00000761726 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_796 | 4 | 7 | 0.00000370067 |
| Rhododendron simsii | chr13 | 6 | CH_rsi_341 | 6 | 15 | 0.0000000135817 |
| Rhododendron simsii | chr03 | 6 | CH_rsi_851 | 3 | 3 | 0.000313051 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_1141 | 4 | 4 | 0.000000206608 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_1526 | 4 | 9 | 0.0000258801 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_254 | 8 | 9 | 7.14382e-18 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_566 | 6 | 8 | 0.0000000000117185 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_744 | 5 | 6 | 0.00000000177948 |
| Selaginella moellendorffii | scaffold_11 | 6 | CH_smo_198 | 3 | 3 | 0.0000648656 |
| Selenicereus undatus | Scaffold_33679 | 6 | CH_sun_226 | 3 | 3 | 0.00013699 |
| Vitis vinifera | chr16 | 6 | CH_vvi_208 | 5 | 6 | 0.00000000431679 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |