Functional clusters

Information

  • Type InterPro
  • Description Heavy metal-associated domain, copper ion-binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corylus avellana 4 5 CH_cav_245 3 3 0.000000176353
Coffea canephora chr8 5 CH_ccan_695 2 11 0.000715475
Citrus clementina scaffold_3 5 CH_ccl_700 2 2 0.000492187
Carpinus fangiana Cfa05 5 CH_cfa_233 3 4 0.000000137654
Chenopodium quinoa C_Quinoa_Scaffold_1280 5 CH_cqu_982 2 2 0.000710732
Daucus carota DCARv2_Chr1 5 CH_dca_735 2 2 0.000956663
Fragaria vesca Fvb5 5 CH_fve_625 2 2 0.00017673
Helianthus annuus HanXRQChr13 5 CH_han_1174 2 2 0.0008115
Lupinus albus Lalb_Chr09 5 CH_lal_675 2 2 0.000524824
Prunus persica Pp05 5 CH_ppe_744 2 2 0.000447577
Pisum sativum chr2LG1 5 CH_psa_607 2 2 0.000312981
Populus trichocarpa Chr03 5 CH_ptr_782 2 2 0.000867002
Phaseolus vulgaris Chr02 5 CH_pvu_665 2 2 0.000734727
Quercus lobata 12 5 CH_qlo_736 3 3 0.0000000399842
Rhododendron simsii chr02 5 CH_rsi_511 3 6 0.00000249782
Sequoiadendron giganteum chr2 5 CH_sgi_2532 2 2 0.000730727
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_674 2 2 0.000454184
Tripterygium wilfordii NC_052251.1 5 CH_twi_520 2 2 0.00083626
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_675 2 2 0.000557543
Vigna mungo CM024074.1 5 CH_vmu_586 2 2 0.000646141
Corylus avellana 4 6 CH_cav_245 3 3 0.000000176353
Coffea canephora chr8 6 CH_ccan_695 2 11 0.000715475
Citrus clementina scaffold_3 6 CH_ccl_700 2 2 0.000492187
Carpinus fangiana Cfa05 6 CH_cfa_233 3 4 0.000000137654
Chenopodium quinoa C_Quinoa_Scaffold_1280 6 CH_cqu_982 2 2 0.000710732
Daucus carota DCARv2_Chr1 6 CH_dca_735 2 2 0.000956663
Fragaria x ananassa Fvb5-1 6 CH_fan_1238 2 2 0.000832663
Fragaria vesca Fvb5 6 CH_fve_625 2 2 0.00017673
Helianthus annuus HanXRQChr13 6 CH_han_1174 2 2 0.0008115
Lupinus albus Lalb_Chr09 6 CH_lal_675 2 2 0.000524824
Prunus persica Pp05 6 CH_ppe_744 2 2 0.000447577
Pisum sativum chr2LG1 6 CH_psa_607 2 2 0.000312981
Populus trichocarpa Chr03 6 CH_ptr_782 2 2 0.000867002
Phaseolus vulgaris Chr02 6 CH_pvu_665 2 2 0.000734727
Quercus lobata 12 6 CH_qlo_736 3 3 0.0000000399842
Rhododendron simsii chr02 6 CH_rsi_511 3 6 0.00000249782
Sequoiadendron giganteum chr2 6 CH_sgi_2532 2 2 0.000730727
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_674 2 2 0.000454184
Tripterygium wilfordii NC_052251.1 6 CH_twi_520 2 2 0.00083626
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_675 2 2 0.000557543
Vigna mungo CM024074.1 6 CH_vmu_586 2 2 0.000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001