Functional clusters
Information
- Type InterPro
- Description 6-phosphogluconolactonase, DevB-type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-11 | 5 | CH_aar_380 | 2 | 2 | 0.000547395 |
| Acer truncatum | chr12 | 5 | CH_acertr_731 | 2 | 2 | 0.000211491 |
| Arabidopsis lyrata | scaffold_6 | 5 | CH_aly_214 | 3 | 3 | 0.0000000653509 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 5 | CH_amhyb_299 | 2 | 2 | 0.000252525 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_198 | 3 | 4 | 0.0000000492455 |
| Brassica carinata | Contig469 | 5 | CH_bca_212 | 4 | 4 | 0.000000000053335 |
| Brassica napus | C07 | 5 | CH_bna_125 | 5 | 9 | 0.000000000000224517 |
| Brassica napus | A06 | 5 | CH_bna_207 | 4 | 5 | 0.0000000000960177 |
| Brassica oleracea | C7 | 5 | CH_bol_17 | 7 | 12 | 9.12677e-21 |
| Brassica rapa | A06 | 5 | CH_bra_38 | 5 | 8 | 0.000000000000179743 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 5 | CH_bvu_412 | 2 | 2 | 0.000248375 |
| Coffea canephora | chr2 | 5 | CH_ccan_488 | 2 | 4 | 0.000127766 |
| Carpinus fangiana | Cfa06 | 5 | CH_cfa_200 | 3 | 3 | 0.0000000344157 |
| Cardamine hirsuta | Chr6 | 5 | CH_chi_246 | 3 | 3 | 0.000000071667 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1001 | 5 | CH_cqu_1052 | 2 | 2 | 0.000995025 |
| Capsella rubella | scaffold_6 | 5 | CH_cru_200 | 3 | 3 | 0.0000000320764 |
| Cucumis sativus L. | chr5 | 5 | CH_csa_389 | 2 | 2 | 0.000250428 |
| Davidia involucrata | GWHABJS00000004 | 5 | CH_din_794 | 2 | 2 | 0.000750188 |
| Davidia involucrata | GWHABJS00000009 | 5 | CH_din_795 | 2 | 2 | 0.000750188 |
| Eutrema salsugineum | scaffold_6 | 5 | CH_esa_503 | 2 | 2 | 0.000761499 |
| Helianthus annuus | HanXRQChr03 | 5 | CH_han_426 | 4 | 20 | 0.0000000586384 |
| Lupinus albus | Lalb_Chr17 | 5 | CH_lal_751 | 2 | 2 | 0.000787236 |
| Lotus japonicus | chr1 | 5 | CH_lja_233 | 3 | 4 | 0.000000613553 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_756 | 2 | 2 | 0.000308404 |
| Medicago truncatula | chr1 | 5 | CH_mtr_1154 | 2 | 2 | 0.000246518 |
| Olea europaea | chr16 | 5 | CH_oeu_708 | 2 | 3 | 0.00096076 |
| Punica granatum | NC_045128.1 | 5 | CH_pgr_604 | 2 | 2 | 0.000750356 |
| Phaseolus vulgaris | Chr09 | 5 | CH_pvu_222 | 3 | 3 | 0.0000000323906 |
| Schrenkiella parvula | ch2-4 | 5 | CH_spa_106 | 3 | 3 | 0.0000000929892 |
| Vigna mungo | CM024072.1 | 5 | CH_vmu_423 | 2 | 2 | 0.000193842 |
| Aethionema arabicum | LG-11 | 6 | CH_aar_380 | 2 | 2 | 0.000547395 |
| Acer truncatum | chr12 | 6 | CH_acertr_731 | 2 | 2 | 0.000211491 |
| Arabidopsis lyrata | scaffold_6 | 6 | CH_aly_214 | 3 | 3 | 0.0000000653509 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 6 | CH_amhyb_299 | 2 | 2 | 0.000252525 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_198 | 3 | 4 | 0.0000000492455 |
| Brassica carinata | Contig469 | 6 | CH_bca_212 | 4 | 4 | 0.000000000053335 |
| Brassica napus | C07 | 6 | CH_bna_125 | 5 | 9 | 0.000000000000224517 |
| Brassica napus | A06 | 6 | CH_bna_207 | 4 | 5 | 0.0000000000960177 |
| Brassica oleracea | C7 | 6 | CH_bol_17 | 7 | 12 | 9.12677e-21 |
| Brassica rapa | A06 | 6 | CH_bra_38 | 5 | 8 | 0.000000000000179743 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 6 | CH_bvu_412 | 2 | 2 | 0.000248375 |
| Coffea canephora | chr2 | 6 | CH_ccan_488 | 2 | 4 | 0.000127766 |
| Carpinus fangiana | Cfa06 | 6 | CH_cfa_200 | 3 | 3 | 0.0000000344157 |
| Cardamine hirsuta | Chr6 | 6 | CH_chi_246 | 3 | 3 | 0.000000071667 |
| Cucumis melo | chr09 | 6 | CH_cme_442 | 2 | 3 | 0.000600367 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1001 | 6 | CH_cqu_1052 | 2 | 2 | 0.000995025 |
| Capsella rubella | scaffold_6 | 6 | CH_cru_200 | 3 | 3 | 0.0000000320764 |
| Cucumis sativus L. | chr5 | 6 | CH_csa_389 | 2 | 2 | 0.000250428 |
| Davidia involucrata | GWHABJS00000004 | 6 | CH_din_794 | 2 | 2 | 0.000750188 |
| Davidia involucrata | GWHABJS00000009 | 6 | CH_din_795 | 2 | 2 | 0.000750188 |
| Eutrema salsugineum | scaffold_6 | 6 | CH_esa_503 | 2 | 2 | 0.000761499 |
| Helianthus annuus | HanXRQChr03 | 6 | CH_han_426 | 4 | 20 | 0.0000000586384 |
| Lupinus albus | Lalb_Chr17 | 6 | CH_lal_751 | 2 | 2 | 0.000787236 |
| Lotus japonicus | chr1 | 6 | CH_lja_233 | 3 | 4 | 0.000000613553 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_756 | 2 | 2 | 0.000308404 |
| Medicago truncatula | chr1 | 6 | CH_mtr_1154 | 2 | 2 | 0.000246518 |
| Olea europaea | chr16 | 6 | CH_oeu_708 | 2 | 3 | 0.00096076 |
| Punica granatum | NC_045128.1 | 6 | CH_pgr_604 | 2 | 2 | 0.000750356 |
| Phaseolus vulgaris | Chr09 | 6 | CH_pvu_222 | 3 | 3 | 0.0000000323906 |
| Schrenkiella parvula | ch2-4 | 6 | CH_spa_106 | 3 | 3 | 0.0000000929892 |
| Vigna mungo | CM024072.1 | 6 | CH_vmu_423 | 2 | 2 | 0.000193842 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |