Functional clusters
Information
- Type InterPro
- Description PPC domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | Contig421 | 5 | CH_bca_1224 | 4 | 10 | 0.0000423005 |
| Camellia sinensis var. sinensis | Chr12 | 5 | CH_camsi_874 | 4 | 16 | 0.000027371 |
| Corylus avellana | 2 | 5 | CH_cav_796 | 3 | 8 | 0.000758214 |
| Carya illinoinensis | Chr12 | 5 | CH_cil_701 | 3 | 4 | 0.000210489 |
| Lupinus albus | Lalb_Chr09 | 5 | CH_lal_563 | 3 | 3 | 0.000236148 |
| Pisum sativum | chr5LG3 | 5 | CH_psa_319 | 4 | 7 | 0.00000371344 |
| Brassica carinata | Contig421 | 6 | CH_bca_1224 | 4 | 10 | 0.0000423005 |
| Camellia sinensis var. sinensis | Chr12 | 6 | CH_camsi_874 | 4 | 16 | 0.000027371 |
| Corylus avellana | 2 | 6 | CH_cav_796 | 3 | 8 | 0.000758214 |
| Carya illinoinensis | Chr12 | 6 | CH_cil_701 | 3 | 4 | 0.000210489 |
| Lupinus albus | Lalb_Chr09 | 6 | CH_lal_563 | 3 | 3 | 0.000236148 |
| Pisum sativum | chr5LG3 | 6 | CH_psa_319 | 4 | 7 | 0.00000371344 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |