Functional clusters
Information
- Type InterPro
- Description Vacuolar protein sorting-associated protein Ist1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC01 | 5 | CH_bca_1076 | 3 | 3 | 0.0000126285 |
| Cannabis sativa | NC_044379.1 | 5 | CH_cansat_427 | 3 | 9 | 0.000155125 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_86 | 5 | 7 | 0.00000000000376739 |
| Citrullus lanatus | CG_Chr08 | 5 | CH_cla_151 | 3 | 3 | 0.00000429706 |
| Durio zibethinus | NW_019167860.1 | 5 | CH_dzi_453 | 3 | 7 | 0.000149801 |
| Malus domestica | Chr03 | 5 | CH_mdo_113 | 6 | 9 | 0.0000000000000340931 |
| Populus trichocarpa | Chr03 | 5 | CH_ptr_431 | 3 | 3 | 0.00000340777 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_1194 | 3 | 13 | 0.000194664 |
| Trochodendron aralioides | group5 | 5 | CH_tar_102 | 5 | 6 | 0.0000000000196661 |
| Trochodendron aralioides | group1 | 5 | CH_tar_469 | 3 | 4 | 0.0000382831 |
| Zea mays | 1 | 5 | CH_zma_113 | 4 | 4 | 0.00000000293379 |
| Zea mays | 9 | 5 | CH_zma_54 | 5 | 5 | 0.00000000000135018 |
| Brassica carinata | ChrC01 | 6 | CH_bca_1076 | 3 | 3 | 0.0000126285 |
| Cannabis sativa | NC_044379.1 | 6 | CH_cansat_427 | 3 | 9 | 0.000155125 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_86 | 5 | 7 | 0.00000000000376739 |
| Citrullus lanatus | CG_Chr08 | 6 | CH_cla_151 | 3 | 3 | 0.00000429706 |
| Durio zibethinus | NW_019167860.1 | 6 | CH_dzi_453 | 3 | 7 | 0.000149801 |
| Malus domestica | Chr03 | 6 | CH_mdo_113 | 6 | 9 | 0.0000000000000340931 |
| Populus trichocarpa | Chr03 | 6 | CH_ptr_431 | 3 | 3 | 0.00000340777 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_1194 | 3 | 13 | 0.000194664 |
| Trochodendron aralioides | group5 | 6 | CH_tar_102 | 5 | 6 | 0.0000000000196661 |
| Trochodendron aralioides | group1 | 6 | CH_tar_469 | 3 | 4 | 0.0000382831 |
| Zea mays | 1 | 6 | CH_zma_113 | 4 | 4 | 0.00000000293379 |
| Zea mays | 9 | 6 | CH_zma_54 | 5 | 5 | 0.00000000000135018 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |