Functional clusters
Information
- Type InterPro
- Description Serine incorporator/TMS membrane protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 5 | CH_arhy_708 | 3 | 5 | 0.00000489253 |
| Corylus avellana | 8 | 5 | CH_cav_399 | 4 | 51 | 0.0000117547 |
| Ceratophyllum demersum | 3 | 5 | CH_cde_505 | 2 | 2 | 0.000789796 |
| Daucus carota | DCARv2_Chr3 | 5 | CH_dca_745 | 2 | 2 | 0.000956663 |
| Lupinus albus | Lalb_Chr14 | 5 | CH_lal_206 | 3 | 3 | 0.000000231376 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_1075 | 3 | 3 | 0.000000124594 |
| Sapria himalayana | scaffold13_12996478 | 5 | CH_shi_177 | 3 | 5 | 0.000000490384 |
| Zea mays | 6 | 5 | CH_zma_80 | 5 | 15 | 0.0000000000710241 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 6 | CH_arhy_708 | 3 | 5 | 0.00000489253 |
| Corylus avellana | 8 | 6 | CH_cav_399 | 4 | 51 | 0.0000117547 |
| Ceratophyllum demersum | 3 | 6 | CH_cde_505 | 2 | 2 | 0.000789796 |
| Daucus carota | DCARv2_Chr3 | 6 | CH_dca_745 | 2 | 2 | 0.000956663 |
| Lupinus albus | Lalb_Chr14 | 6 | CH_lal_206 | 3 | 3 | 0.000000231376 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_1075 | 3 | 3 | 0.000000124594 |
| Sapria himalayana | scaffold13_12996478 | 6 | CH_shi_177 | 3 | 5 | 0.000000490384 |
| Zea mays | 6 | 6 | CH_zma_80 | 5 | 15 | 0.0000000000710241 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |