Functional clusters

Information

  • Type InterPro
  • Description SNU66/SART1 family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC04 5 CH_bca_379 3 3 0.00000000685435
Cardamine hirsuta Chr6 5 CH_chi_763 2 5 0.000691133
Citrullus lanatus CG_Chr08 5 CH_cla_317 2 4 0.000532222
Erigeron canadensis Conyza_canadensis_scaffold:9 5 CH_eca_530 2 2 0.0000448722
Lonicera japonica GWHAAZE00000001 5 CH_lonja_1049 2 2 0.000359324
Malus domestica Chr07 5 CH_mdo_1090 2 2 0.000227527
Quercus lobata 9 5 CH_qlo_967 3 4 0.00000134328
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_1234 2 2 0.000239192
Salvia bowleyana GWHASIU00000002 5 CH_sbo_203 4 10 0.000000000296626
Solanum lycopersicum SL4.0ch11 5 CH_sly_707 2 2 0.000176082
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_688 2 2 0.000557543
Vigna mungo CM024076.1 5 CH_vmu_331 2 2 0.0000646141
Brassica carinata ChrC04 6 CH_bca_379 3 3 0.00000000685435
Cardamine hirsuta Chr6 6 CH_chi_763 2 5 0.000691133
Citrullus lanatus CG_Chr08 6 CH_cla_317 2 4 0.000532222
Erigeron canadensis Conyza_canadensis_scaffold:9 6 CH_eca_530 2 2 0.0000448722
Lonicera japonica GWHAAZE00000001 6 CH_lonja_1049 2 2 0.000359324
Malus domestica Chr07 6 CH_mdo_1090 2 2 0.000227527
Quercus lobata 9 6 CH_qlo_967 3 4 0.00000134328
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_1234 2 2 0.000239192
Salvia bowleyana GWHASIU00000002 6 CH_sbo_203 4 10 0.000000000296626
Solanum lycopersicum SL4.0ch11 6 CH_sly_707 2 2 0.000176082
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_688 2 2 0.000557543
Vigna mungo CM024076.1 6 CH_vmu_331 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001