Functional clusters

Information

  • Type InterPro
  • Description Late embryogenesis abundant protein, LEA_2 subgroup

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group3 5 CH_ach_288 3 3 0.0000671915
Actinidia chinensis Lachesis_group21 5 CH_ach_420 3 4 0.000268523
Actinidia chinensis Lachesis_group6 5 CH_ach_43 5 5 0.0000000000895305
Actinidia chinensis Lachesis_group3 5 CH_ach_97 4 4 0.0000000784777
Amborella trichopoda AmTr_v1.0_scaffold00030 5 CH_atr_137 5 7 0.00000000174234
Amborella trichopoda AmTr_v1.0_scaffold00040 5 CH_atr_351 3 3 0.0000566483
Brassica carinata ChrB01 5 CH_bca_1757 4 14 0.000431772
Camellia sinensis var. sinensis Chr13 5 CH_camsi_368 5 9 0.00000000638854
Cannabis sativa NC_044374.1 5 CH_cansat_111 6 11 0.000000000118218
Capsicum annuum PGAv.1.6.scaffold574 5 CH_can_328 4 5 0.000000391828
Corylus avellana 11 5 CH_cav_580 3 3 0.00015251
Coffea canephora chr0 5 CH_ccan_326 3 9 0.0000208791
Coffea canephora chr8 5 CH_ccan_365 3 11 0.0000410076
Coffea canephora chr6 5 CH_ccan_65 5 21 0.0000000000288807
Citrus clementina scaffold_6 5 CH_ccl_352 4 5 0.000000610551
Ceratophyllum demersum 1 5 CH_cde_182 3 3 0.0000612418
Carpinus fangiana Cfa01 5 CH_cfa_311 4 5 0.00000339474
Carpinus fangiana Cfa06 5 CH_cfa_518 3 3 0.000309655
Carpinus fangiana Cfa06 5 CH_cfa_519 3 3 0.000309655
Cardamine hirsuta Chr5 5 CH_chi_557 3 3 0.000116208
Carya illinoinensis Chr11 5 CH_cil_144 7 9 0.000000000000725401
Carya illinoinensis Chr12 5 CH_cil_252 5 5 0.00000000341816
Carya illinoinensis Chr09 5 CH_cil_281 5 6 0.0000000204665
Corchorus olitorius AWUE01013721.1 5 CH_col_64 4 5 0.000000373881
Carica papaya supercontig_104 5 CH_cpa_216 4 8 0.00000315524
Chenopodium quinoa C_Quinoa_Scaffold_3389 5 CH_cqu_1029 3 5 0.000833767
Cucumis sativus L. chr1 5 CH_csa_232 4 6 0.00000214803
Daucus carota DCARv2_Chr4 5 CH_dca_715 3 4 0.000713181
Davidia involucrata GWHABJS00000017 5 CH_din_202 5 7 0.0000000110456
Davidia involucrata GWHABJS00000009 5 CH_din_23 10 11 5.18693e-23
Davidia involucrata GWHABJS00000004 5 CH_din_278 4 4 0.000000324455
Davidia involucrata GWHABJS00000020 5 CH_din_613 3 3 0.000196581
Durio zibethinus NW_019167937.1 5 CH_dzi_134 5 5 0.00000000152135
Durio zibethinus NW_019168381.1 5 CH_dzi_31 9 9 2.13343e-20
Durio zibethinus NW_019167838.1 5 CH_dzi_44 8 8 1.1225e-17
Eucalyptus grandis Chr11 5 CH_egr_1229 3 3 0.000246152
Eucalyptus grandis Chr10 5 CH_egr_1230 3 3 0.000246152
Eucalyptus grandis Chr05 5 CH_egr_32 16 17 3.95738e-39
Eucalyptus grandis Chr10 5 CH_egr_381 6 6 0.00000000000154248
Erythranthe guttata scaffold_6 5 CH_egut_184 5 5 0.000000000548063
Fragaria vesca Fvb7 5 CH_fve_203 5 5 0.000000000941756
Fragaria vesca Fvb5 5 CH_fve_6 19 25 2.00336e-43
Fragaria vesca Fvb7 5 CH_fve_676 3 3 0.000260892
Gossypium hirsutum A09 5 CH_ghi_1230 3 3 0.000601552
Gossypium hirsutum D09 5 CH_ghi_1231 3 3 0.000601552
Gossypium raimondii Chr06 5 CH_gra_582 3 3 0.000340931
Lotus japonicus chr3 5 CH_lja_287 4 5 0.00000249247
Lonicera japonica GWHAAZE00000003 5 CH_lonja_249 6 8 0.0000000000111173
Lonicera japonica GWHAAZE00000004 5 CH_lonja_843 3 3 0.00012603
Lactuca sativa Lsat_1_v8_lg_3 5 CH_lsa_851 4 23 0.000689712
Malus domestica Chr07 5 CH_mdo_1205 3 3 0.000359474
Malus domestica Chr07 5 CH_mdo_1206 3 3 0.000359474
Malus domestica Chr06 5 CH_mdo_13 14 17 1.24078e-31
Malus domestica Chr14 5 CH_mdo_790 4 7 0.0000232749
Malus domestica Chr14 5 CH_mdo_96 8 12 0.00000000000000353231
Manihot esculenta Chromosome09 5 CH_mes_601 3 3 0.000233036
Medicago truncatula chr3 5 CH_mtr_1026 3 3 0.000105501
Nelumbo nucifera chr7 5 CH_nnu_101 5 5 0.000000000202161
Nelumbo nucifera chr1 5 CH_nnu_578 4 19 0.000581957
Nicotiana tabacum Nitab4.5_0000915 5 CH_nta_170 3 3 0.0000365557
Olea europaea chr16 5 CH_oeu_180 4 5 0.000000617029
Punica granatum NC_045127.1 5 CH_pgr_192 5 7 0.0000000296039
Punica granatum NC_045130.1 5 CH_pgr_49 8 9 1.11698e-16
Prunus persica Pp02 5 CH_ppe_165 6 6 0.000000000003898
Prunus persica Pp07 5 CH_ppe_373 5 10 0.000000442152
Prunus persica Pp06 5 CH_ppe_449 4 5 0.00000394936
Prunus persica Pp05 5 CH_ppe_726 3 3 0.000347778
Pisum sativum chr5LG3 5 CH_psa_661 3 4 0.000477199
Populus trichocarpa Chr01 5 CH_ptr_590 3 3 0.000162916
Quercus lobata 4 5 CH_qlo_1003 4 5 0.00000237191
Quercus lobata 1 5 CH_qlo_1537 3 3 0.000259193
Quercus lobata CM012294 5 CH_qlo_70 13 18 4.86166e-28
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1197 3 3 0.000195862
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_183 7 8 0.00000000000000802517
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_274 6 7 0.00000000000476021
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_28 16 27 2.26495e-34
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_433 5 6 0.00000000272915
Salvia bowleyana GWHASIU00000003 5 CH_sbo_528 3 3 0.0000908573
Salvia bowleyana GWHASIU00000008 5 CH_sbo_74 8 8 2.10175e-19
Sequoiadendron giganteum chr8 5 CH_sgi_1207 4 7 0.000000495884
Sequoiadendron giganteum chr1 5 CH_sgi_460 6 9 0.000000000000573444
Solanum pennellii Spenn-ch01 5 CH_spe_611 3 4 0.000117206
Solanum tuberosum ST4.03ch09 5 CH_stu_638 3 3 0.0000725761
Solanum tuberosum ST4.03ch01 5 CH_stu_756 3 4 0.00029004
Trochodendron aralioides group15 5 CH_tar_370 4 4 0.00000197988
Trochodendron aralioides group1 5 CH_tar_39 9 11 1.39434e-17
Trochodendron aralioides group2 5 CH_tar_49 8 9 8.85694e-16
Trochodendron aralioides group0 5 CH_tar_6 16 23 3.36644e-32
Trochodendron aralioides group18 5 CH_tar_928 3 3 0.000724743
Theobroma cacao Chromosome_3 5 CH_tca_141 6 7 0.00000000000406864
Trifolium pratense Tp57577_TGAC_v2_LG6 5 CH_tpr_132 5 6 0.00000000160294
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_124 5 8 0.00000000132828
Vitis vinifera chr15 5 CH_vvi_231 4 4 0.0000000140301
Actinidia chinensis Lachesis_group3 6 CH_ach_288 3 3 0.0000671915
Actinidia chinensis Lachesis_group21 6 CH_ach_420 3 4 0.000268523
Actinidia chinensis Lachesis_group6 6 CH_ach_43 5 5 0.0000000000895305
Actinidia chinensis Lachesis_group3 6 CH_ach_97 4 4 0.0000000784777
Amborella trichopoda AmTr_v1.0_scaffold00030 6 CH_atr_137 5 7 0.00000000174234
Amborella trichopoda AmTr_v1.0_scaffold00040 6 CH_atr_351 3 3 0.0000566483
Brassica carinata ChrB01 6 CH_bca_1757 4 14 0.000431772
Camellia sinensis var. sinensis Chr13 6 CH_camsi_368 5 9 0.00000000638854
Cannabis sativa NC_044374.1 6 CH_cansat_111 6 11 0.000000000118218
Capsicum annuum PGAv.1.6.scaffold574 6 CH_can_328 4 5 0.000000391828
Corylus avellana 11 6 CH_cav_580 3 3 0.00015251
Coffea canephora chr0 6 CH_ccan_326 3 9 0.0000208791
Coffea canephora chr8 6 CH_ccan_365 3 11 0.0000410076
Coffea canephora chr6 6 CH_ccan_65 5 21 0.0000000000288807
Citrus clementina scaffold_6 6 CH_ccl_352 4 5 0.000000610551
Ceratophyllum demersum 1 6 CH_cde_182 3 3 0.0000612418
Carpinus fangiana Cfa01 6 CH_cfa_311 4 5 0.00000339474
Carpinus fangiana Cfa06 6 CH_cfa_518 3 3 0.000309655
Carpinus fangiana Cfa06 6 CH_cfa_519 3 3 0.000309655
Cardamine hirsuta Chr5 6 CH_chi_557 3 3 0.000116208
Carya illinoinensis Chr11 6 CH_cil_144 7 9 0.000000000000725401
Carya illinoinensis Chr12 6 CH_cil_252 5 5 0.00000000341816
Carya illinoinensis Chr09 6 CH_cil_281 5 6 0.0000000204665
Corchorus olitorius AWUE01013721.1 6 CH_col_64 4 5 0.000000373881
Carica papaya supercontig_104 6 CH_cpa_216 4 8 0.00000315524
Chenopodium quinoa C_Quinoa_Scaffold_3389 6 CH_cqu_1029 3 5 0.000833767
Cucumis sativus L. chr1 6 CH_csa_232 4 6 0.00000214803
Daucus carota DCARv2_Chr4 6 CH_dca_715 3 4 0.000713181
Davidia involucrata GWHABJS00000017 6 CH_din_202 5 7 0.0000000110456
Davidia involucrata GWHABJS00000009 6 CH_din_23 10 11 5.18693e-23
Davidia involucrata GWHABJS00000004 6 CH_din_278 4 4 0.000000324455
Davidia involucrata GWHABJS00000020 6 CH_din_613 3 3 0.000196581
Durio zibethinus NW_019167937.1 6 CH_dzi_134 5 5 0.00000000152135
Durio zibethinus NW_019168381.1 6 CH_dzi_31 9 9 2.13343e-20
Durio zibethinus NW_019167838.1 6 CH_dzi_44 8 8 1.1225e-17
Eucalyptus grandis Chr11 6 CH_egr_1229 3 3 0.000246152
Eucalyptus grandis Chr10 6 CH_egr_1230 3 3 0.000246152
Eucalyptus grandis Chr05 6 CH_egr_32 16 17 3.95738e-39
Eucalyptus grandis Chr10 6 CH_egr_381 6 6 0.00000000000154248
Erythranthe guttata scaffold_6 6 CH_egut_184 5 5 0.000000000548063
Fragaria x ananassa Fvb5-3 6 CH_fan_11 13 20 1.07432e-25
Fragaria x ananassa Fvb5-1 6 CH_fan_2 19 40 7.14836e-37
Fragaria x ananassa Fvb7-2 6 CH_fan_235 5 5 0.00000000451401
Fragaria x ananassa Fvb5-2 6 CH_fan_274 5 6 0.0000000270368
Fragaria x ananassa Fvb5-2 6 CH_fan_29 10 17 5.02123e-19
Fragaria x ananassa Fvb7-2 6 CH_fan_319 5 7 0.0000000944639
Fragaria x ananassa Fvb7-3 6 CH_fan_493 4 4 0.00000215882
Fragaria x ananassa Fvb5-4 6 CH_fan_57 9 15 4.08532e-16
Fragaria x ananassa Fvb7-1 6 CH_fan_724 4 6 0.0000322734
Fragaria x ananassa Fvb7-1 6 CH_fan_725 4 6 0.0000322734
Fragaria x ananassa Fvb5-4 6 CH_fan_9 13 16 7.81924e-28
Fragaria vesca Fvb7 6 CH_fve_203 5 5 0.000000000941756
Fragaria vesca Fvb5 6 CH_fve_6 19 25 2.00336e-43
Fragaria vesca Fvb7 6 CH_fve_676 3 3 0.000260892
Gossypium hirsutum A09 6 CH_ghi_1230 3 3 0.000601552
Gossypium hirsutum D09 6 CH_ghi_1231 3 3 0.000601552
Gossypium raimondii Chr06 6 CH_gra_582 3 3 0.000340931
Lotus japonicus chr3 6 CH_lja_287 4 5 0.00000249247
Lonicera japonica GWHAAZE00000003 6 CH_lonja_249 6 8 0.0000000000111173
Lonicera japonica GWHAAZE00000004 6 CH_lonja_843 3 3 0.00012603
Lactuca sativa Lsat_1_v8_lg_3 6 CH_lsa_851 4 23 0.000689712
Malus domestica Chr07 6 CH_mdo_1205 3 3 0.000359474
Malus domestica Chr07 6 CH_mdo_1206 3 3 0.000359474
Malus domestica Chr06 6 CH_mdo_13 14 17 1.24078e-31
Malus domestica Chr14 6 CH_mdo_790 4 7 0.0000232749
Malus domestica Chr14 6 CH_mdo_96 8 12 0.00000000000000353231
Manihot esculenta Chromosome09 6 CH_mes_601 3 3 0.000233036
Medicago truncatula chr3 6 CH_mtr_1026 3 3 0.000105501
Nelumbo nucifera chr7 6 CH_nnu_101 5 5 0.000000000202161
Nelumbo nucifera chr1 6 CH_nnu_578 4 19 0.000581957
Nicotiana tabacum Nitab4.5_0000915 6 CH_nta_170 3 3 0.0000365557
Olea europaea chr16 6 CH_oeu_180 4 5 0.000000617029
Punica granatum NC_045127.1 6 CH_pgr_192 5 7 0.0000000296039
Punica granatum NC_045130.1 6 CH_pgr_49 8 9 1.11698e-16
Prunus persica Pp02 6 CH_ppe_165 6 6 0.000000000003898
Prunus persica Pp07 6 CH_ppe_373 5 10 0.000000442152
Prunus persica Pp06 6 CH_ppe_449 4 5 0.00000394936
Prunus persica Pp05 6 CH_ppe_726 3 3 0.000347778
Pisum sativum chr5LG3 6 CH_psa_661 3 4 0.000477199
Populus trichocarpa Chr01 6 CH_ptr_590 3 3 0.000162916
Quercus lobata 4 6 CH_qlo_1003 4 5 0.00000237191
Quercus lobata 1 6 CH_qlo_1537 3 3 0.000259193
Quercus lobata CM012294 6 CH_qlo_70 13 18 4.86166e-28
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1197 3 3 0.000195862
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_183 7 8 0.00000000000000802517
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_274 6 7 0.00000000000476021
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_28 16 27 2.26495e-34
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_433 5 6 0.00000000272915
Salvia bowleyana GWHASIU00000003 6 CH_sbo_528 3 3 0.0000908573
Salvia bowleyana GWHASIU00000008 6 CH_sbo_74 8 8 2.10175e-19
Sequoiadendron giganteum chr8 6 CH_sgi_1207 4 7 0.000000495884
Sequoiadendron giganteum chr1 6 CH_sgi_460 6 9 0.000000000000573444
Solanum pennellii Spenn-ch01 6 CH_spe_611 3 4 0.000117206
Solanum tuberosum ST4.03ch09 6 CH_stu_638 3 3 0.0000725761
Solanum tuberosum ST4.03ch01 6 CH_stu_756 3 4 0.00029004
Trochodendron aralioides group15 6 CH_tar_370 4 4 0.00000197988
Trochodendron aralioides group1 6 CH_tar_39 9 11 1.39434e-17
Trochodendron aralioides group2 6 CH_tar_49 8 9 8.85694e-16
Trochodendron aralioides group0 6 CH_tar_6 16 23 3.36644e-32
Trochodendron aralioides group18 6 CH_tar_928 3 3 0.000724743
Theobroma cacao Chromosome_3 6 CH_tca_141 6 7 0.00000000000406864
Trifolium pratense Tp57577_TGAC_v2_LG6 6 CH_tpr_132 5 6 0.00000000160294
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_124 5 8 0.00000000132828
Vitis vinifera chr15 6 CH_vvi_231 4 4 0.0000000140301

Available child term results

Ontology identifier Description Number of clusters
IPR013990 Water stress and hypersensitive response domain 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001