Functional clusters

Information

  • Type InterPro
  • Description Ubiquitin fusion degradation protein Ufd1-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC07 5 CH_bca_1889 2 2 0.00059854
Capsicum annuum PGAv.1.6.scaffold170 5 CH_can_681 2 2 0.000247831
Medicago truncatula chr4 5 CH_mtr_551 3 4 0.000000101282
Quercus lobata 7 5 CH_qlo_1013 3 7 0.00000279795
Rhododendron simsii chr03 5 CH_rsi_961 2 2 0.000645307
Solanum tuberosum ST4.03ch01 5 CH_stu_703 2 2 0.000153736
Theobroma cacao Chromosome_3 5 CH_tca_557 3 16 0.0000899774
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_209 3 3 0.0000000859546
Vitis vinifera chr12 5 CH_vvi_682 2 2 0.000456378
Zea mays 1 5 CH_zma_516 2 2 0.000766969
Brassica carinata ChrC07 6 CH_bca_1889 2 2 0.00059854
Capsicum annuum PGAv.1.6.scaffold170 6 CH_can_681 2 2 0.000247831
Medicago truncatula chr4 6 CH_mtr_551 3 4 0.000000101282
Quercus lobata 7 6 CH_qlo_1013 3 7 0.00000279795
Rhododendron simsii chr03 6 CH_rsi_961 2 2 0.000645307
Solanum tuberosum ST4.03ch01 6 CH_stu_703 2 2 0.000153736
Theobroma cacao Chromosome_3 6 CH_tca_557 3 16 0.0000899774
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_209 3 3 0.0000000859546
Vitis vinifera chr12 6 CH_vvi_682 2 2 0.000456378
Zea mays 1 6 CH_zma_516 2 2 0.000766969

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001