Functional clusters

Information

  • Type InterPro
  • Description Checkpoint protein Rad17/Rad24

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group26 5 CH_ach_89 3 3 0.0000000442632
Brassica oleracea C2 5 CH_bol_662 2 2 0.000196117
Daucus carota DCARv2_Chr4 5 CH_dca_714 3 57 0.000711976
Davidia involucrata GWHABJS00000002 5 CH_din_802 2 2 0.000750188
Davidia involucrata GWHABJS00000011 5 CH_din_803 2 2 0.000750188
Davidia involucrata GWHABJS00000012 5 CH_din_804 2 2 0.000750188
Durio zibethinus NW_019167937.1 5 CH_dzi_536 2 2 0.000463489
Hydrangea macrophylla Hma1.2p1_0186F.1 5 CH_hma_544 2 2 0.000333259
Lonicera japonica GWHAAZE00000007 5 CH_lonja_234 4 4 0.00000000000322208
Magnolia biondii Chr03 5 CH_mbi_912 2 2 0.000145698
Sequoiadendron giganteum chr5 5 CH_sgi_2047 2 2 0.000146145
Sapria himalayana scaffold34_6262321 5 CH_shi_61 4 7 0.0000000000981458
Tripterygium wilfordii NC_052237.1 5 CH_twi_494 2 2 0.000557507
Vanilla planifolia CM028161.1 5 CH_vpl_533 2 2 0.000221664
Vitis vinifera chr18 5 CH_vvi_600 2 2 0.000228189
Actinidia chinensis Lachesis_group26 6 CH_ach_89 3 3 0.0000000442632
Brassica oleracea C2 6 CH_bol_662 2 2 0.000196117
Daucus carota DCARv2_Chr4 6 CH_dca_714 3 57 0.000711976
Davidia involucrata GWHABJS00000002 6 CH_din_802 2 2 0.000750188
Davidia involucrata GWHABJS00000011 6 CH_din_803 2 2 0.000750188
Davidia involucrata GWHABJS00000012 6 CH_din_804 2 2 0.000750188
Durio zibethinus NW_019167937.1 6 CH_dzi_536 2 2 0.000463489
Hydrangea macrophylla Hma1.2p1_0186F.1 6 CH_hma_544 2 2 0.000333259
Lonicera japonica GWHAAZE00000007 6 CH_lonja_234 4 4 0.00000000000322208
Magnolia biondii Chr03 6 CH_mbi_912 2 2 0.000145698
Sequoiadendron giganteum chr5 6 CH_sgi_2047 2 2 0.000146145
Sapria himalayana scaffold34_6262321 6 CH_shi_61 4 7 0.0000000000981458
Tripterygium wilfordii NC_052237.1 6 CH_twi_494 2 2 0.000557507
Vanilla planifolia CM028161.1 6 CH_vpl_533 2 2 0.000221664
Vitis vinifera chr18 6 CH_vvi_600 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001