Functional clusters

Information

  • Type InterPro
  • Description Translation release factor pelota

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-7 5 CH_aar_272 2 2 0.0000912326
Acer truncatum chr8 5 CH_acertr_745 2 2 0.000211491
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 5 CH_arhy_128 6 6 2.70888e-18
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 5 CH_arhy_591 3 3 0.000000611736
Brassica oleracea C1 5 CH_bol_660 2 2 0.000196117
Brassica rapa A08 5 CH_bra_457 2 2 0.000257588
Coffea canephora chr2 5 CH_ccan_368 2 6 0.0000425888
Carica papaya supercontig_123 5 CH_cpa_447 2 3 0.000285185
Chenopodium quinoa C_Quinoa_Scaffold_3429 5 CH_cqu_923 2 2 0.000473821
Eucalyptus grandis Chr02 5 CH_egr_1060 2 2 0.0000585274
Simmondsia chinensis GWHAASQ00000025 5 CH_sci_358 2 3 0.000255417
Sechium edule LG11 5 CH_sed_321 2 2 0.0000713419
Trochodendron aralioides group1 5 CH_tar_357 4 46 0.000001584
Trifolium pratense Tp57577_TGAC_v2_scaf_465 5 CH_tpr_477 2 2 0.0000756974
Aethionema arabicum LG-7 6 CH_aar_272 2 2 0.0000912326
Acer truncatum chr8 6 CH_acertr_745 2 2 0.000211491
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 6 CH_arhy_128 6 6 2.70888e-18
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 6 CH_arhy_591 3 3 0.000000611736
Brassica oleracea C1 6 CH_bol_660 2 2 0.000196117
Brassica rapa A08 6 CH_bra_457 2 2 0.000257588
Coffea canephora chr2 6 CH_ccan_368 2 6 0.0000425888
Carica papaya supercontig_123 6 CH_cpa_447 2 3 0.000285185
Chenopodium quinoa C_Quinoa_Scaffold_3429 6 CH_cqu_923 2 2 0.000473821
Eucalyptus grandis Chr02 6 CH_egr_1060 2 2 0.0000585274
Simmondsia chinensis GWHAASQ00000025 6 CH_sci_358 2 3 0.000255417
Sechium edule LG11 6 CH_sed_321 2 2 0.0000713419
Trochodendron aralioides group1 6 CH_tar_357 4 46 0.000001584
Trifolium pratense Tp57577_TGAC_v2_scaf_465 6 CH_tpr_477 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001