Functional clusters
Information
- Type InterPro
- Description TB2/DP1/HVA22-related protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr3 | 5 | CH_camsi_373 | 4 | 5 | 0.00000000700535 |
| Cannabis sativa | NC_044375.1 | 5 | CH_cansat_266 | 3 | 3 | 0.00000142294 |
| Corylus avellana | 9 | 5 | CH_cav_159 | 5 | 10 | 0.00000000132557 |
| Corylus avellana | 1 | 5 | CH_cav_238 | 6 | 59 | 0.000000141742 |
| Davidia involucrata | GWHABJS00000005 | 5 | CH_din_226 | 4 | 8 | 0.0000000262743 |
| Eucalyptus grandis | Chr02 | 5 | CH_egr_613 | 4 | 7 | 0.0000000104143 |
| Lotus japonicus | chr4 | 5 | CH_lja_126 | 4 | 5 | 0.0000000130496 |
| Lonicera japonica | GWHAAZE00000005 | 5 | CH_lonja_104 | 7 | 7 | 1.83141e-19 |
| Medicago truncatula | chr4 | 5 | CH_mtr_347 | 4 | 4 | 0.000000000284035 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_301 | 3 | 4 | 0.00000633276 |
| Prunus persica | Pp08 | 5 | CH_ppe_315 | 4 | 6 | 0.0000000444242 |
| Pisum sativum | chr7LG7 | 5 | CH_psa_306 | 3 | 3 | 0.00000228572 |
| Quercus lobata | 11 | 5 | CH_qlo_1097 | 3 | 4 | 0.0000108725 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_127 | 7 | 12 | 7.961e-18 |
| Rhododendron simsii | chr11 | 5 | CH_rsi_294 | 4 | 4 | 0.00000000146735 |
| Solanum tuberosum | ST4.03ch00 | 5 | CH_stu_627 | 3 | 5 | 0.0000523526 |
| Trochodendron aralioides | group4 | 5 | CH_tar_207 | 4 | 4 | 0.0000000265671 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_232 | 4 | 8 | 0.00000030611 |
| Vitis vinifera | chr3_random | 5 | CH_vvi_431 | 3 | 3 | 0.0000133652 |
| Vitis vinifera | chr3 | 5 | CH_vvi_69 | 7 | 7 | 2.6024e-18 |
| Camellia sinensis var. sinensis | Chr3 | 6 | CH_camsi_373 | 4 | 5 | 0.00000000700535 |
| Cannabis sativa | NC_044375.1 | 6 | CH_cansat_266 | 3 | 3 | 0.00000142294 |
| Corylus avellana | 9 | 6 | CH_cav_159 | 5 | 10 | 0.00000000132557 |
| Corylus avellana | 1 | 6 | CH_cav_238 | 6 | 59 | 0.000000141742 |
| Davidia involucrata | GWHABJS00000005 | 6 | CH_din_226 | 4 | 8 | 0.0000000262743 |
| Eucalyptus grandis | Chr02 | 6 | CH_egr_613 | 4 | 7 | 0.0000000104143 |
| Lotus japonicus | chr4 | 6 | CH_lja_126 | 4 | 5 | 0.0000000130496 |
| Lonicera japonica | GWHAAZE00000005 | 6 | CH_lonja_104 | 7 | 7 | 1.83141e-19 |
| Medicago truncatula | chr4 | 6 | CH_mtr_347 | 4 | 4 | 0.000000000284035 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_301 | 3 | 4 | 0.00000633276 |
| Prunus persica | Pp08 | 6 | CH_ppe_315 | 4 | 6 | 0.0000000444242 |
| Pisum sativum | chr7LG7 | 6 | CH_psa_306 | 3 | 3 | 0.00000228572 |
| Quercus lobata | 11 | 6 | CH_qlo_1097 | 3 | 4 | 0.0000108725 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_127 | 7 | 12 | 7.961e-18 |
| Rhododendron simsii | chr11 | 6 | CH_rsi_294 | 4 | 4 | 0.00000000146735 |
| Solanum tuberosum | ST4.03ch00 | 6 | CH_stu_627 | 3 | 5 | 0.0000523526 |
| Trochodendron aralioides | group4 | 6 | CH_tar_207 | 4 | 4 | 0.0000000265671 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_232 | 4 | 8 | 0.00000030611 |
| Vitis vinifera | chr3_random | 6 | CH_vvi_431 | 3 | 3 | 0.0000133652 |
| Vitis vinifera | chr3 | 6 | CH_vvi_69 | 7 | 7 | 2.6024e-18 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |