Functional clusters

Information

  • Type InterPro
  • Description Glutathione S-transferase, N-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00010 5 CH_atr_72 6 6 0.00000000000128254
Brassica napus C06 5 CH_bna_1329 3 3 0.000438277
Brassica rapa A07 5 CH_bra_439 3 3 0.000218631
Beta vulgaris Chr5_EL10_PGA_scaffold2 5 CH_bvu_19 10 15 1.57694e-20
Camellia sinensis var. sinensis Chr7 5 CH_camsi_19 12 13 2.73509e-27
Camellia sinensis var. sinensis Chr6 5 CH_camsi_351 6 12 0.0000000033966
Capsicum annuum PGAv.1.6.scaffold27 5 CH_can_122 7 8 0.000000000000294453
Capsicum annuum PGAv.1.6.scaffold1003 5 CH_can_32 12 13 5.71209e-26
Citrus clementina scaffold_9 5 CH_ccl_19 20 49 5.67842e-34
Capsella rubella scaffold_1 5 CH_cru_274 4 4 0.00000043073
Cucumis sativus L. chr1 5 CH_csa_468 3 4 0.000553013
Daucus carota DCARv2_Chr7 5 CH_dca_134 5 6 0.0000000023519
Daucus carota DCARv2_Chr8 5 CH_dca_371 4 9 0.0000308125
Eutrema salsugineum scaffold_5 5 CH_esa_425 3 3 0.000241123
Gossypium hirsutum D09 5 CH_ghi_1317 4 14 0.000940662
Glycine max Gm07 5 CH_gma_22 11 11 2.71262e-26
Hydrangea macrophylla Hma1.2p1_0671F.1 5 CH_hma_134 4 4 0.000000112721
Lupinus albus Lalb_Chr19 5 CH_lal_649 3 4 0.000343838
Lonicera japonica GWHAAZE00000008 5 CH_lonja_163 7 7 0.00000000000000794597
Malus domestica Chr05 5 CH_mdo_51 10 17 1.42329e-19
Medicago truncatula chr1 5 CH_mtr_1127 3 3 0.000208044
Petunia axillaris Peaxi162Scf00035 5 CH_pax_141 5 6 0.00000000773802
Petunia axillaris Peaxi162Scf00103 5 CH_pax_290 4 5 0.0000031067
Prunus persica Pp05 5 CH_ppe_208 7 14 0.000000000100245
Quercus lobata 10 5 CH_qlo_1521 4 7 0.000219652
Quercus lobata 7 5 CH_qlo_406 7 8 0.00000000000213716
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_201 9 27 0.0000000000000262554
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_337 7 18 0.0000000000682347
Salix brachista GWHAAZH00000016 5 CH_sbr_1 29 58 2.82683e-54
Simmondsia chinensis GWHAASQ00000024 5 CH_sci_9 13 20 1.42684e-26
Sequoiadendron giganteum chr6 5 CH_sgi_217 10 14 1.52459e-19
Sequoiadendron giganteum chr1 5 CH_sgi_26 23 51 2.29369e-43
Sequoiadendron giganteum chr4 5 CH_sgi_513 7 10 0.00000000000173769
Solanum lycopersicum SL4.0ch07 5 CH_sly_40 10 10 4.86203e-23
Solanum lycopersicum SL4.0ch01 5 CH_sly_530 4 7 0.0000256765
Selaginella moellendorffii scaffold_14 5 CH_smo_157 4 5 0.0000111689
Schrenkiella parvula ch4-6 5 CH_spa_118 4 4 0.000000261197
Schrenkiella parvula ch5-6 5 CH_spa_262 3 3 0.000150782
Solanum tuberosum ST4.03ch05 5 CH_stu_375 4 4 0.000000415377
Trochodendron aralioides group9 5 CH_tar_577 3 3 0.000105972
Vanilla planifolia CM028150.1 5 CH_vpl_176 4 5 0.000000612139
Zea mays 3 5 CH_zma_362 4 9 0.000092103
Zea mays 1 5 CH_zma_375 4 10 0.000153253
Amborella trichopoda AmTr_v1.0_scaffold00010 6 CH_atr_72 6 6 0.00000000000128254
Brassica napus C06 6 CH_bna_1329 3 3 0.000438277
Brassica rapa A07 6 CH_bra_439 3 3 0.000218631
Beta vulgaris Chr5_EL10_PGA_scaffold2 6 CH_bvu_19 10 15 1.57694e-20
Camellia sinensis var. sinensis Chr7 6 CH_camsi_19 12 13 2.73509e-27
Camellia sinensis var. sinensis Chr6 6 CH_camsi_351 6 12 0.0000000033966
Capsicum annuum PGAv.1.6.scaffold27 6 CH_can_122 7 8 0.000000000000294453
Capsicum annuum PGAv.1.6.scaffold1003 6 CH_can_32 12 13 5.71209e-26
Citrus clementina scaffold_9 6 CH_ccl_19 20 49 5.67842e-34
Capsella rubella scaffold_1 6 CH_cru_274 4 4 0.00000043073
Cucumis sativus L. chr1 6 CH_csa_468 3 4 0.000553013
Daucus carota DCARv2_Chr7 6 CH_dca_134 5 6 0.0000000023519
Daucus carota DCARv2_Chr8 6 CH_dca_371 4 9 0.0000308125
Eutrema salsugineum scaffold_5 6 CH_esa_425 3 3 0.000241123
Fragaria x ananassa Fvb3-1 6 CH_fan_332 5 10 0.000000112319
Fragaria x ananassa Fvb3-3 6 CH_fan_407 4 4 0.000000594079
Fragaria x ananassa Fvb5-4 6 CH_fan_849 4 10 0.000123849
Gossypium hirsutum D09 6 CH_ghi_1317 4 14 0.000940662
Glycine max Gm07 6 CH_gma_22 11 11 2.71262e-26
Hydrangea macrophylla Hma1.2p1_0671F.1 6 CH_hma_134 4 4 0.000000112721
Lupinus albus Lalb_Chr19 6 CH_lal_649 3 4 0.000343838
Lonicera japonica GWHAAZE00000008 6 CH_lonja_163 7 7 0.00000000000000794597
Malus domestica Chr05 6 CH_mdo_51 10 17 1.42329e-19
Medicago truncatula chr1 6 CH_mtr_1127 3 3 0.000208044
Petunia axillaris Peaxi162Scf00035 6 CH_pax_141 5 6 0.00000000773802
Petunia axillaris Peaxi162Scf00103 6 CH_pax_290 4 5 0.0000031067
Prunus persica Pp05 6 CH_ppe_208 7 14 0.000000000100245
Quercus lobata 10 6 CH_qlo_1521 4 7 0.000219652
Quercus lobata 7 6 CH_qlo_406 7 8 0.00000000000213716
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_201 9 27 0.0000000000000262554
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_337 7 18 0.0000000000682347
Salix brachista GWHAAZH00000016 6 CH_sbr_1 29 58 2.82683e-54
Simmondsia chinensis GWHAASQ00000024 6 CH_sci_9 13 20 1.42684e-26
Sequoiadendron giganteum chr6 6 CH_sgi_217 10 14 1.52459e-19
Sequoiadendron giganteum chr1 6 CH_sgi_26 23 51 2.29369e-43
Sequoiadendron giganteum chr4 6 CH_sgi_513 7 10 0.00000000000173769
Solanum lycopersicum SL4.0ch07 6 CH_sly_40 10 10 4.86203e-23
Solanum lycopersicum SL4.0ch01 6 CH_sly_530 4 7 0.0000256765
Selaginella moellendorffii scaffold_14 6 CH_smo_157 4 5 0.0000111689
Schrenkiella parvula ch4-6 6 CH_spa_118 4 4 0.000000261197
Schrenkiella parvula ch5-6 6 CH_spa_262 3 3 0.000150782
Solanum tuberosum ST4.03ch05 6 CH_stu_375 4 4 0.000000415377
Trochodendron aralioides group9 6 CH_tar_577 3 3 0.000105972
Vanilla planifolia CM028150.1 6 CH_vpl_176 4 5 0.000000612139
Zea mays 3 6 CH_zma_362 4 9 0.000092103
Zea mays 1 6 CH_zma_375 4 10 0.000153253

Available child term results

Ontology identifier Description Number of clusters
IPR034333 Glutathione S-transferases, class Zeta , N-terminal 33
IPR040075 Glutathione S-transferase Theta, N-terminal 16

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001