Functional clusters
Information
- Type InterPro
- Description Nudix hydrolase 6-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_3 | 5 | CH_aly_289 | 3 | 4 | 0.000000914792 |
| Arabidopsis thaliana | Chr2 | 5 | CH_ath_192 | 3 | 3 | 0.0000000430914 |
| Camellia sinensis var. sinensis | Chr5 | 5 | CH_camsi_760 | 3 | 6 | 0.00000529681 |
| Capsella rubella | scaffold_3 | 5 | CH_cru_329 | 3 | 5 | 0.00000280586 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 5 | CH_eca_845 | 2 | 3 | 0.000807658 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_37 | 13 | 16 | 1.06755e-37 |
| Hydrangea macrophylla | Hma1.2p1_0253F.1 | 5 | CH_hma_320 | 2 | 2 | 0.000111086 |
| Lonicera japonica | GWHAAZE00000006 | 5 | CH_lonja_46 | 12 | 16 | 4.60096e-31 |
| Lonicera japonica | GWHAAZE00000021 | 5 | CH_lonja_53 | 11 | 13 | 3.87593e-29 |
| Magnolia biondii | Chr15 | 5 | CH_mbi_1135 | 2 | 2 | 0.000485661 |
| Quercus lobata | 4 | 5 | CH_qlo_306 | 5 | 5 | 0.0000000000000134308 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_111 | 13 | 79 | 1.44119e-26 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_2368 | 3 | 9 | 0.000396863 |
| Solanum tuberosum | ST4.03ch08 | 5 | CH_stu_509 | 3 | 6 | 0.0000129924 |
| Arabidopsis lyrata | scaffold_3 | 6 | CH_aly_289 | 3 | 4 | 0.000000914792 |
| Arabidopsis thaliana | Chr2 | 6 | CH_ath_192 | 3 | 3 | 0.0000000430914 |
| Camellia sinensis var. sinensis | Chr5 | 6 | CH_camsi_760 | 3 | 6 | 0.00000529681 |
| Capsella rubella | scaffold_3 | 6 | CH_cru_329 | 3 | 5 | 0.00000280586 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 6 | CH_eca_845 | 2 | 3 | 0.000807658 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_37 | 13 | 16 | 1.06755e-37 |
| Hydrangea macrophylla | Hma1.2p1_0253F.1 | 6 | CH_hma_320 | 2 | 2 | 0.000111086 |
| Lonicera japonica | GWHAAZE00000006 | 6 | CH_lonja_46 | 12 | 16 | 4.60096e-31 |
| Lonicera japonica | GWHAAZE00000021 | 6 | CH_lonja_53 | 11 | 13 | 3.87593e-29 |
| Magnolia biondii | Chr15 | 6 | CH_mbi_1135 | 2 | 2 | 0.000485661 |
| Quercus lobata | 4 | 6 | CH_qlo_306 | 5 | 5 | 0.0000000000000134308 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_111 | 13 | 79 | 1.44119e-26 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_2368 | 3 | 9 | 0.000396863 |
| Solanum tuberosum | ST4.03ch08 | 6 | CH_stu_509 | 3 | 6 | 0.0000129924 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |