Functional clusters

Information

  • Type InterPro
  • Description Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-2 5 CH_aar_139 3 3 0.0000000499425
Arabidopsis lyrata scaffold_7 5 CH_aly_105 4 4 0.0000000000301961
Arabidopsis thaliana Chr4 5 CH_ath_99 4 6 0.0000000000370334
Brassica carinata ChrC09 5 CH_bca_1351 3 11 0.0000768302
Brassica carinata ChrC01 5 CH_bca_665 3 3 0.000000466096
Brassica carinata ChrC09 5 CH_bca_666 3 3 0.000000466096
Brassica napus A01 5 CH_bna_510 3 3 0.000000351429
Brassica napus C03 5 CH_bna_695 3 5 0.00000351354
Brassica napus C01 5 CH_bna_908 3 9 0.0000295011
Brassica oleracea C1 5 CH_bol_421 3 9 0.00000753513
Brassica oleracea C3 5 CH_bol_888 2 2 0.000915212
Brassica rapa A01 5 CH_bra_162 3 3 0.000000154824
Cardamine hirsuta Chr7 5 CH_chi_134 4 4 0.000000000034678
Capsella rubella scaffold_7 5 CH_cru_285 3 4 0.000000641451
Daucus carota DCARv2_Chr3 5 CH_dca_97 4 4 0.0000000000544834
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_812 2 2 0.000673083
Erythranthe guttata scaffold_8 5 CH_egut_414 3 5 0.00000953956
Erythranthe guttata scaffold_10 5 CH_egut_555 3 11 0.000157188
Eutrema salsugineum scaffold_1 5 CH_esa_178 3 3 0.000000173971
Lotus japonicus chr2 5 CH_lja_224 3 3 0.000000429537
Lactuca sativa Lsat_1_v8_lg_7 5 CH_lsa_374 3 3 0.000000221936
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1432 2 3 0.000717541
Sequoiadendron giganteum chr7 5 CH_sgi_722 4 5 0.000000000858305
Solanum lycopersicum SL4.0ch07 5 CH_sly_880 2 2 0.000586941
Selaginella moellendorffii scaffold_22 5 CH_smo_35 5 14 0.000000000063832
Schrenkiella parvula ch7-5 5 CH_spa_362 2 2 0.00078734
Solanum pennellii Spenn-ch07 5 CH_spe_789 2 2 0.00044479
Solanum tuberosum ST4.03ch07 5 CH_stu_852 2 2 0.000512453
Aethionema arabicum LG-2 6 CH_aar_139 3 3 0.0000000499425
Arabidopsis lyrata scaffold_7 6 CH_aly_105 4 4 0.0000000000301961
Arabidopsis thaliana Chr4 6 CH_ath_99 4 6 0.0000000000370334
Brassica carinata ChrC09 6 CH_bca_1351 3 11 0.0000768302
Brassica carinata ChrC01 6 CH_bca_665 3 3 0.000000466096
Brassica carinata ChrC09 6 CH_bca_666 3 3 0.000000466096
Brassica napus A01 6 CH_bna_510 3 3 0.000000351429
Brassica napus C03 6 CH_bna_695 3 5 0.00000351354
Brassica napus C01 6 CH_bna_908 3 9 0.0000295011
Brassica oleracea C1 6 CH_bol_421 3 9 0.00000753513
Brassica oleracea C3 6 CH_bol_888 2 2 0.000915212
Brassica rapa A01 6 CH_bra_162 3 3 0.000000154824
Cardamine hirsuta Chr7 6 CH_chi_134 4 4 0.000000000034678
Capsella rubella scaffold_7 6 CH_cru_285 3 4 0.000000641451
Daucus carota DCARv2_Chr3 6 CH_dca_97 4 4 0.0000000000544834
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_812 2 2 0.000673083
Erythranthe guttata scaffold_8 6 CH_egut_414 3 5 0.00000953956
Erythranthe guttata scaffold_10 6 CH_egut_555 3 11 0.000157188
Eutrema salsugineum scaffold_1 6 CH_esa_178 3 3 0.000000173971
Lotus japonicus chr2 6 CH_lja_224 3 3 0.000000429537
Lactuca sativa Lsat_1_v8_lg_7 6 CH_lsa_374 3 3 0.000000221936
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1432 2 3 0.000717541
Sequoiadendron giganteum chr7 6 CH_sgi_722 4 5 0.000000000858305
Solanum lycopersicum SL4.0ch07 6 CH_sly_880 2 2 0.000586941
Selaginella moellendorffii scaffold_22 6 CH_smo_35 5 14 0.000000000063832
Schrenkiella parvula ch7-5 6 CH_spa_362 2 2 0.00078734
Solanum pennellii Spenn-ch07 6 CH_spe_789 2 2 0.00044479
Solanum tuberosum ST4.03ch07 6 CH_stu_852 2 2 0.000512453

Available child term results

Ontology identifier Description Number of clusters
IPR039524 GPI ethanolamine phosphate transferase 3 18
IPR039527 GPI ethanolamine phosphate transferase 2 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001