Functional clusters
Information
- Type InterPro
- Description Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-2 | 5 | CH_aar_139 | 3 | 3 | 0.0000000499425 |
Arabidopsis lyrata | scaffold_7 | 5 | CH_aly_105 | 4 | 4 | 0.0000000000301961 |
Arabidopsis thaliana | Chr4 | 5 | CH_ath_99 | 4 | 6 | 0.0000000000370334 |
Brassica carinata | ChrC09 | 5 | CH_bca_1351 | 3 | 11 | 0.0000768302 |
Brassica carinata | ChrC01 | 5 | CH_bca_665 | 3 | 3 | 0.000000466096 |
Brassica carinata | ChrC09 | 5 | CH_bca_666 | 3 | 3 | 0.000000466096 |
Brassica napus | A01 | 5 | CH_bna_510 | 3 | 3 | 0.000000351429 |
Brassica napus | C03 | 5 | CH_bna_695 | 3 | 5 | 0.00000351354 |
Brassica napus | C01 | 5 | CH_bna_908 | 3 | 9 | 0.0000295011 |
Brassica oleracea | C1 | 5 | CH_bol_421 | 3 | 9 | 0.00000753513 |
Brassica oleracea | C3 | 5 | CH_bol_888 | 2 | 2 | 0.000915212 |
Brassica rapa | A01 | 5 | CH_bra_162 | 3 | 3 | 0.000000154824 |
Cardamine hirsuta | Chr7 | 5 | CH_chi_134 | 4 | 4 | 0.000000000034678 |
Capsella rubella | scaffold_7 | 5 | CH_cru_285 | 3 | 4 | 0.000000641451 |
Daucus carota | DCARv2_Chr3 | 5 | CH_dca_97 | 4 | 4 | 0.0000000000544834 |
Erigeron canadensis | Conyza_canadensis_scaffold:5 | 5 | CH_eca_812 | 2 | 2 | 0.000673083 |
Erythranthe guttata | scaffold_8 | 5 | CH_egut_414 | 3 | 5 | 0.00000953956 |
Erythranthe guttata | scaffold_10 | 5 | CH_egut_555 | 3 | 11 | 0.000157188 |
Eutrema salsugineum | scaffold_1 | 5 | CH_esa_178 | 3 | 3 | 0.000000173971 |
Lotus japonicus | chr2 | 5 | CH_lja_224 | 3 | 3 | 0.000000429537 |
Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_374 | 3 | 3 | 0.000000221936 |
Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_1432 | 2 | 3 | 0.000717541 |
Sequoiadendron giganteum | chr7 | 5 | CH_sgi_722 | 4 | 5 | 0.000000000858305 |
Solanum lycopersicum | SL4.0ch07 | 5 | CH_sly_880 | 2 | 2 | 0.000586941 |
Selaginella moellendorffii | scaffold_22 | 5 | CH_smo_35 | 5 | 14 | 0.000000000063832 |
Schrenkiella parvula | ch7-5 | 5 | CH_spa_362 | 2 | 2 | 0.00078734 |
Solanum pennellii | Spenn-ch07 | 5 | CH_spe_789 | 2 | 2 | 0.00044479 |
Solanum tuberosum | ST4.03ch07 | 5 | CH_stu_852 | 2 | 2 | 0.000512453 |
Aethionema arabicum | LG-2 | 6 | CH_aar_139 | 3 | 3 | 0.0000000499425 |
Arabidopsis lyrata | scaffold_7 | 6 | CH_aly_105 | 4 | 4 | 0.0000000000301961 |
Arabidopsis thaliana | Chr4 | 6 | CH_ath_99 | 4 | 6 | 0.0000000000370334 |
Brassica carinata | ChrC09 | 6 | CH_bca_1351 | 3 | 11 | 0.0000768302 |
Brassica carinata | ChrC01 | 6 | CH_bca_665 | 3 | 3 | 0.000000466096 |
Brassica carinata | ChrC09 | 6 | CH_bca_666 | 3 | 3 | 0.000000466096 |
Brassica napus | A01 | 6 | CH_bna_510 | 3 | 3 | 0.000000351429 |
Brassica napus | C03 | 6 | CH_bna_695 | 3 | 5 | 0.00000351354 |
Brassica napus | C01 | 6 | CH_bna_908 | 3 | 9 | 0.0000295011 |
Brassica oleracea | C1 | 6 | CH_bol_421 | 3 | 9 | 0.00000753513 |
Brassica oleracea | C3 | 6 | CH_bol_888 | 2 | 2 | 0.000915212 |
Brassica rapa | A01 | 6 | CH_bra_162 | 3 | 3 | 0.000000154824 |
Cardamine hirsuta | Chr7 | 6 | CH_chi_134 | 4 | 4 | 0.000000000034678 |
Capsella rubella | scaffold_7 | 6 | CH_cru_285 | 3 | 4 | 0.000000641451 |
Daucus carota | DCARv2_Chr3 | 6 | CH_dca_97 | 4 | 4 | 0.0000000000544834 |
Erigeron canadensis | Conyza_canadensis_scaffold:5 | 6 | CH_eca_812 | 2 | 2 | 0.000673083 |
Erythranthe guttata | scaffold_8 | 6 | CH_egut_414 | 3 | 5 | 0.00000953956 |
Erythranthe guttata | scaffold_10 | 6 | CH_egut_555 | 3 | 11 | 0.000157188 |
Eutrema salsugineum | scaffold_1 | 6 | CH_esa_178 | 3 | 3 | 0.000000173971 |
Lotus japonicus | chr2 | 6 | CH_lja_224 | 3 | 3 | 0.000000429537 |
Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_374 | 3 | 3 | 0.000000221936 |
Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_1432 | 2 | 3 | 0.000717541 |
Sequoiadendron giganteum | chr7 | 6 | CH_sgi_722 | 4 | 5 | 0.000000000858305 |
Solanum lycopersicum | SL4.0ch07 | 6 | CH_sly_880 | 2 | 2 | 0.000586941 |
Selaginella moellendorffii | scaffold_22 | 6 | CH_smo_35 | 5 | 14 | 0.000000000063832 |
Schrenkiella parvula | ch7-5 | 6 | CH_spa_362 | 2 | 2 | 0.00078734 |
Solanum pennellii | Spenn-ch07 | 6 | CH_spe_789 | 2 | 2 | 0.00044479 |
Solanum tuberosum | ST4.03ch07 | 6 | CH_stu_852 | 2 | 2 | 0.000512453 |
Available child term results
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |