Functional clusters

Information

  • Type InterPro
  • Description DAHP synthetase, class II

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-6 5 CH_aar_332 2 2 0.000273698
Brassica carinata Contig372 5 CH_bca_2132 2 2 0.000961939
Capsicum annuum PGAv.1.6.scaffold905 5 CH_can_839 2 2 0.000826105
Carica papaya supercontig_98 5 CH_cpa_655 2 2 0.000950661
Gossypium hirsutum D05 5 CH_ghi_1204 2 2 0.000560733
Lupinus albus Lalb_Chr23 5 CH_lal_86 4 4 0.0000000000303595
Magnolia biondii Chr05 5 CH_mbi_906 2 2 0.000145698
Malus domestica Chr01 5 CH_mdo_535 3 3 0.000000474554
Nelumbo nucifera chr1 5 CH_nnu_554 2 2 0.000481684
Rhododendron simsii chr08 5 CH_rsi_1024 2 2 0.000967961
Rhododendron simsii chr05 5 CH_rsi_1025 2 2 0.000967961
Simmondsia chinensis GWHAASQ00000026 5 CH_sci_448 2 2 0.000510856
Solanum pennellii Spenn-ch11 5 CH_spe_238 3 3 0.0000000296764
Solanum tuberosum ST4.03ch11 5 CH_stu_778 2 2 0.000307472
Trochodendron aralioides group11 5 CH_tar_872 2 2 0.000600366
Utricularia gibba unitig_747 5 CH_ugi_366 2 2 0.000820479
Aethionema arabicum LG-6 6 CH_aar_332 2 2 0.000273698
Brassica carinata Contig372 6 CH_bca_2132 2 2 0.000961939
Capsicum annuum PGAv.1.6.scaffold905 6 CH_can_839 2 2 0.000826105
Carica papaya supercontig_98 6 CH_cpa_655 2 2 0.000950661
Gossypium hirsutum D05 6 CH_ghi_1204 2 2 0.000560733
Lupinus albus Lalb_Chr23 6 CH_lal_86 4 4 0.0000000000303595
Magnolia biondii Chr05 6 CH_mbi_906 2 2 0.000145698
Malus domestica Chr01 6 CH_mdo_535 3 3 0.000000474554
Nelumbo nucifera chr1 6 CH_nnu_554 2 2 0.000481684
Rhododendron simsii chr08 6 CH_rsi_1024 2 2 0.000967961
Rhododendron simsii chr05 6 CH_rsi_1025 2 2 0.000967961
Simmondsia chinensis GWHAASQ00000026 6 CH_sci_448 2 2 0.000510856
Solanum pennellii Spenn-ch11 6 CH_spe_238 3 3 0.0000000296764
Solanum tuberosum ST4.03ch11 6 CH_stu_778 2 2 0.000307472
Trochodendron aralioides group11 6 CH_tar_872 2 2 0.000600366
Utricularia gibba unitig_747 6 CH_ugi_366 2 2 0.000820479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001