Functional clusters

Information

  • Type InterPro
  • Description Zinc finger, PHD-type

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00043 5 CH_atr_435 4 9 0.000119254
Carpinus fangiana Cfa07 5 CH_cfa_532 3 3 0.000450794
Solanum pennellii Spenn-ch01 5 CH_spe_376 5 12 0.00000172888
Amborella trichopoda AmTr_v1.0_scaffold00043 6 CH_atr_435 4 9 0.000119254
Carpinus fangiana Cfa07 6 CH_cfa_532 3 3 0.000450794
Solanum pennellii Spenn-ch01 6 CH_spe_376 5 12 0.00000172888

Available child term results

Ontology identifier Description Number of clusters
IPR019787 Zinc finger, PHD-finger 4
IPR041955 ATX3/4/5, ePHD domain 2
IPR042011 ATX3/4/5, PHD domain 2
IPR044104 Alfin1-like, PHD finger 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001