Functional clusters
Information
- Type InterPro
- Description Receptor, ligand binding region
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr6 | 5 | CH_acertr_423 | 3 | 3 | 0.00000608328 |
| Aquilegia oxysepala | CHR07 | 5 | CH_aox_3 | 11 | 17 | 1.8328e-25 |
| Aquilegia oxysepala | CHR04 | 5 | CH_aox_77 | 5 | 6 | 0.000000000220941 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 5 | CH_arhy_517 | 4 | 7 | 0.000000185865 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 5 | CH_arhy_766 | 3 | 3 | 0.0000104466 |
| Brassica oleracea | C7 | 5 | CH_bol_422 | 3 | 3 | 0.00000794891 |
| Camellia sinensis var. sinensis | Chr14 | 5 | CH_camsi_423 | 5 | 14 | 0.0000000214379 |
| Capsicum annuum | PGAv.1.6.scaffold1030 | 5 | CH_can_376 | 4 | 15 | 0.00000164475 |
| Corylus avellana | 5 | 5 | CH_cav_676 | 3 | 4 | 0.000348089 |
| Citrus clementina | scaffold_1 | 5 | CH_ccl_151 | 5 | 5 | 0.0000000000114302 |
| Citrus clementina | scaffold_1 | 5 | CH_ccl_180 | 5 | 6 | 0.0000000000685362 |
| Carya illinoinensis | Chr08 | 5 | CH_cil_123 | 6 | 6 | 0.000000000000108015 |
| Davidia involucrata | GWHABJS00000003 | 5 | CH_din_92 | 7 | 17 | 0.000000000000160196 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_1129 | 3 | 3 | 0.000107006 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_18 | 21 | 36 | 6.85531e-48 |
| Gossypium raimondii | Chr01 | 5 | CH_gra_192 | 4 | 4 | 0.00000000179182 |
| Helianthus annuus | HanXRQChr01 | 5 | CH_han_685 | 4 | 11 | 0.0000092793 |
| Hydrangea macrophylla | Hma1.2p1_0156F.1 | 5 | CH_hma_495 | 3 | 7 | 0.00023535 |
| Magnolia biondii | Chr11 | 5 | CH_mbi_832 | 3 | 6 | 0.000108852 |
| Magnolia biondii | Chr02 | 5 | CH_mbi_833 | 3 | 6 | 0.000108852 |
| Malus domestica | Chr15 | 5 | CH_mdo_194 | 5 | 5 | 0.0000000000189506 |
| Medicago truncatula | chr5 | 5 | CH_mtr_1019 | 3 | 8 | 0.0000963116 |
| Olea europaea | chr11 | 5 | CH_oeu_373 | 3 | 4 | 0.0000693716 |
| Oryza sativa ssp. japonica | chr09 | 5 | CH_osa_40 | 8 | 20 | 5.84014e-19 |
| Petunia axillaris | Peaxi162Scf00027 | 5 | CH_pax_377 | 3 | 5 | 0.0000415493 |
| Prunus persica | Pp07 | 5 | CH_ppe_147 | 6 | 6 | 0.000000000000199562 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_371 | 5 | 21 | 0.00000000788493 |
| Populus trichocarpa | Chr06 | 5 | CH_ptr_90 | 7 | 7 | 2.52353e-16 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_268 | 7 | 15 | 0.0000000000036269 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_279 | 7 | 16 | 0.00000000000644015 |
| Salvia bowleyana | GWHASIU00000008 | 5 | CH_sbo_101 | 7 | 13 | 5.75108e-16 |
| Simmondsia chinensis | GWHAASQ00000021 | 5 | CH_sci_158 | 4 | 11 | 0.000000435889 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_105 | 15 | 39 | 6.69226e-27 |
| Solanum tuberosum | ST4.03ch03 | 5 | CH_stu_439 | 3 | 3 | 0.00000220596 |
| Solanum tuberosum | ST4.03ch06 | 5 | CH_stu_531 | 3 | 5 | 0.0000220475 |
| Trochodendron aralioides | group4 | 5 | CH_tar_408 | 4 | 9 | 0.00000744277 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_36 | 7 | 8 | 2.0441e-17 |
| Vitis vinifera | chr19 | 5 | CH_vvi_797 | 3 | 8 | 0.000980549 |
| Acer truncatum | chr6 | 6 | CH_acertr_423 | 3 | 3 | 0.00000608328 |
| Aquilegia oxysepala | CHR07 | 6 | CH_aox_3 | 11 | 17 | 1.8328e-25 |
| Aquilegia oxysepala | CHR04 | 6 | CH_aox_77 | 5 | 6 | 0.000000000220941 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 6 | CH_arhy_517 | 4 | 7 | 0.000000185865 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 6 | CH_arhy_766 | 3 | 3 | 0.0000104466 |
| Brassica oleracea | C7 | 6 | CH_bol_422 | 3 | 3 | 0.00000794891 |
| Camellia sinensis var. sinensis | Chr14 | 6 | CH_camsi_423 | 5 | 14 | 0.0000000214379 |
| Capsicum annuum | PGAv.1.6.scaffold1030 | 6 | CH_can_376 | 4 | 15 | 0.00000164475 |
| Corylus avellana | 5 | 6 | CH_cav_676 | 3 | 4 | 0.000348089 |
| Citrus clementina | scaffold_1 | 6 | CH_ccl_151 | 5 | 5 | 0.0000000000114302 |
| Citrus clementina | scaffold_1 | 6 | CH_ccl_180 | 5 | 6 | 0.0000000000685362 |
| Carya illinoinensis | Chr08 | 6 | CH_cil_123 | 6 | 6 | 0.000000000000108015 |
| Cucumis melo | chr03 | 6 | CH_cme_78 | 5 | 5 | 0.00000000000789372 |
| Davidia involucrata | GWHABJS00000003 | 6 | CH_din_92 | 7 | 17 | 0.000000000000160196 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_1129 | 3 | 3 | 0.000107006 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_18 | 21 | 36 | 6.85531e-48 |
| Fragaria x ananassa | Fvb2-4 | 6 | CH_fan_210 | 5 | 7 | 0.00000000118824 |
| Fragaria x ananassa | Fvb2-4 | 6 | CH_fan_800 | 3 | 3 | 0.0000757223 |
| Fragaria x ananassa | Fvb2-1 | 6 | CH_fan_90 | 7 | 13 | 0.0000000000000693777 |
| Gossypium raimondii | Chr01 | 6 | CH_gra_192 | 4 | 4 | 0.00000000179182 |
| Helianthus annuus | HanXRQChr01 | 6 | CH_han_685 | 4 | 11 | 0.0000092793 |
| Hydrangea macrophylla | Hma1.2p1_0156F.1 | 6 | CH_hma_495 | 3 | 7 | 0.00023535 |
| Magnolia biondii | Chr11 | 6 | CH_mbi_832 | 3 | 6 | 0.000108852 |
| Magnolia biondii | Chr02 | 6 | CH_mbi_833 | 3 | 6 | 0.000108852 |
| Malus domestica | Chr15 | 6 | CH_mdo_194 | 5 | 5 | 0.0000000000189506 |
| Medicago truncatula | chr5 | 6 | CH_mtr_1019 | 3 | 8 | 0.0000963116 |
| Olea europaea | chr11 | 6 | CH_oeu_373 | 3 | 4 | 0.0000693716 |
| Oryza sativa ssp. japonica | chr09 | 6 | CH_osa_40 | 8 | 20 | 5.84014e-19 |
| Petunia axillaris | Peaxi162Scf00027 | 6 | CH_pax_377 | 3 | 5 | 0.0000415493 |
| Prunus persica | Pp07 | 6 | CH_ppe_147 | 6 | 6 | 0.000000000000199562 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_371 | 5 | 21 | 0.00000000788493 |
| Populus trichocarpa | Chr06 | 6 | CH_ptr_90 | 7 | 7 | 2.52353e-16 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_268 | 7 | 15 | 0.0000000000036269 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_279 | 7 | 16 | 0.00000000000644015 |
| Salvia bowleyana | GWHASIU00000008 | 6 | CH_sbo_101 | 7 | 13 | 5.75108e-16 |
| Simmondsia chinensis | GWHAASQ00000021 | 6 | CH_sci_158 | 4 | 11 | 0.000000435889 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_105 | 15 | 39 | 6.69226e-27 |
| Solanum tuberosum | ST4.03ch03 | 6 | CH_stu_439 | 3 | 3 | 0.00000220596 |
| Solanum tuberosum | ST4.03ch06 | 6 | CH_stu_531 | 3 | 5 | 0.0000220475 |
| Trochodendron aralioides | group4 | 6 | CH_tar_408 | 4 | 9 | 0.00000744277 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_36 | 7 | 8 | 2.0441e-17 |
| Vitis vinifera | chr19 | 6 | CH_vvi_797 | 3 | 8 | 0.000980549 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |