Functional clusters
Information
- Type InterPro
- Description Ribonuclease T2-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-1 | 5 | CH_aar_383 | 2 | 2 | 0.000547395 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 5 | CH_amhyb_17 | 6 | 7 | 5.59236e-17 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 5 | CH_arhy_611 | 4 | 16 | 0.000000874621 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 5 | CH_arhy_982 | 4 | 52 | 0.00012908 |
| Amborella trichopoda | AmTr_v1.0_scaffold00064 | 5 | CH_atr_93 | 4 | 4 | 0.0000000000225629 |
| Capsicum annuum | PGAv.1.6.scaffold584 | 5 | CH_can_109 | 5 | 5 | 0.0000000000000880461 |
| Capsicum annuum | PGAv.1.6.scaffold567 | 5 | CH_can_871 | 3 | 17 | 0.000832338 |
| Cicer arietinum L. | Ca_LG2_v3 | 5 | CH_car_93 | 3 | 4 | 0.00000036343 |
| Coffea canephora | chr5 | 5 | CH_ccan_165 | 4 | 52 | 0.0000000627451 |
| Carya illinoinensis | Chr05 | 5 | CH_cil_196 | 4 | 4 | 0.000000000050012 |
| Citrullus lanatus | CG_Chr10 | 5 | CH_cla_20 | 6 | 9 | 0.0000000000000311641 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3751 | 5 | CH_cqu_21 | 9 | 9 | 1.79247e-26 |
| Davidia involucrata | GWHABJS00000008 | 5 | CH_din_299 | 3 | 3 | 0.000000825433 |
| Durio zibethinus | NW_019167926.1 | 5 | CH_dzi_265 | 3 | 3 | 0.00000146619 |
| Durio zibethinus | NW_019167882.1 | 5 | CH_dzi_68 | 5 | 6 | 0.000000000000623578 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 5 | CH_eca_680 | 2 | 2 | 0.000269233 |
| Gossypium hirsutum | A06 | 5 | CH_ghi_622 | 3 | 3 | 0.00000245979 |
| Glycine max | Gm02 | 5 | CH_gma_178 | 4 | 4 | 0.000000000223929 |
| Gossypium raimondii | Chr11 | 5 | CH_gra_88 | 9 | 79 | 0.00000000000000201808 |
| Hydrangea macrophylla | Hma1.2p1_0795F.1 | 5 | CH_hma_83 | 3 | 3 | 0.0000000185113 |
| Lupinus albus | Lalb_Chr10 | 5 | CH_lal_106 | 4 | 4 | 0.000000000434141 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_258 | 4 | 4 | 0.0000000013321 |
| Magnolia biondii | Chr07 | 5 | CH_mbi_441 | 4 | 11 | 0.000000279211 |
| Magnolia biondii | Chr05 | 5 | CH_mbi_601 | 4 | 18 | 0.00000405824 |
| Malus domestica | Chr13 | 5 | CH_mdo_574 | 3 | 3 | 0.000000981464 |
| Malus domestica | Chr15 | 5 | CH_mdo_859 | 3 | 8 | 0.0000549099 |
| Manihot esculenta | Chromosome04 | 5 | CH_mes_526 | 3 | 18 | 0.0000911456 |
| Medicago truncatula | chr2 | 5 | CH_mtr_1316 | 3 | 7 | 0.000578869 |
| Petunia axillaris | Peaxi162Scf00457 | 5 | CH_pax_315 | 3 | 3 | 0.00000719496 |
| Petunia axillaris | Peaxi162Scf00023 | 5 | CH_pax_74 | 5 | 6 | 0.0000000000128177 |
| Papaver somniferum | NC_039368.1 | 5 | CH_pso_729 | 3 | 5 | 0.000011721 |
| Papaver somniferum | NC_039359.1 | 5 | CH_pso_837 | 3 | 7 | 0.0000410095 |
| Phaseolus vulgaris | Chr04 | 5 | CH_pvu_310 | 5 | 58 | 0.00000127004 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_330 | 3 | 3 | 0.00000231593 |
| Quercus lobata | 3 | 5 | CH_qlo_1149 | 3 | 5 | 0.0000223787 |
| Salvia bowleyana | GWHASIU00000007 | 5 | CH_sbo_562 | 2 | 2 | 0.000136494 |
| Salix brachista | GWHAAZH00000010 | 5 | CH_sbr_652 | 2 | 2 | 0.00063014 |
| Sechium edule | LG06 | 5 | CH_sed_364 | 3 | 6 | 0.000124436 |
| Solanum lycopersicum | SL4.0ch07 | 5 | CH_sly_375 | 3 | 3 | 0.000000852661 |
| Solanum pennellii | Spenn-ch07 | 5 | CH_spe_313 | 3 | 3 | 0.000000249282 |
| Solanum tuberosum | ST4.03ch07 | 5 | CH_stu_158 | 5 | 7 | 0.00000000000326069 |
| Trochodendron aralioides | group16 | 5 | CH_tar_943 | 2 | 2 | 0.000900549 |
| Theobroma cacao | Chromosome_10 | 5 | CH_tca_26 | 10 | 15 | 2.50941e-26 |
| Tripterygium wilfordii | NC_052251.1 | 5 | CH_twi_106 | 5 | 5 | 0.000000000431111 |
| Tripterygium wilfordii | NC_052253.1 | 5 | CH_twi_26 | 10 | 21 | 1.15715e-18 |
| Tripterygium wilfordii | NC_052254.1 | 5 | CH_twi_356 | 4 | 10 | 0.0000565315 |
| Tripterygium wilfordii | NC_052243.1 | 5 | CH_twi_416 | 3 | 3 | 0.000167798 |
| Tripterygium wilfordii | NC_052233.1 | 5 | CH_twi_417 | 3 | 3 | 0.000167798 |
| Tripterygium wilfordii | NC_052237.1 | 5 | CH_twi_418 | 3 | 3 | 0.000167798 |
| Aethionema arabicum | LG-1 | 6 | CH_aar_383 | 2 | 2 | 0.000547395 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_3 | 6 | CH_amhyb_17 | 6 | 7 | 5.59236e-17 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 6 | CH_arhy_611 | 4 | 16 | 0.000000874621 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 6 | CH_arhy_982 | 4 | 52 | 0.00012908 |
| Amborella trichopoda | AmTr_v1.0_scaffold00064 | 6 | CH_atr_93 | 4 | 4 | 0.0000000000225629 |
| Capsicum annuum | PGAv.1.6.scaffold584 | 6 | CH_can_109 | 5 | 5 | 0.0000000000000880461 |
| Capsicum annuum | PGAv.1.6.scaffold567 | 6 | CH_can_871 | 3 | 17 | 0.000832338 |
| Cicer arietinum L. | Ca_LG2_v3 | 6 | CH_car_93 | 3 | 4 | 0.00000036343 |
| Coffea canephora | chr5 | 6 | CH_ccan_165 | 4 | 52 | 0.0000000627451 |
| Carya illinoinensis | Chr05 | 6 | CH_cil_196 | 4 | 4 | 0.000000000050012 |
| Citrullus lanatus | CG_Chr10 | 6 | CH_cla_20 | 6 | 9 | 0.0000000000000311641 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3751 | 6 | CH_cqu_21 | 9 | 9 | 1.79247e-26 |
| Davidia involucrata | GWHABJS00000008 | 6 | CH_din_299 | 3 | 3 | 0.000000825433 |
| Durio zibethinus | NW_019167926.1 | 6 | CH_dzi_265 | 3 | 3 | 0.00000146619 |
| Durio zibethinus | NW_019167882.1 | 6 | CH_dzi_68 | 5 | 6 | 0.000000000000623578 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 6 | CH_eca_680 | 2 | 2 | 0.000269233 |
| Gossypium hirsutum | A06 | 6 | CH_ghi_622 | 3 | 3 | 0.00000245979 |
| Glycine max | Gm02 | 6 | CH_gma_178 | 4 | 4 | 0.000000000223929 |
| Gossypium raimondii | Chr11 | 6 | CH_gra_88 | 9 | 79 | 0.00000000000000201808 |
| Hydrangea macrophylla | Hma1.2p1_0795F.1 | 6 | CH_hma_83 | 3 | 3 | 0.0000000185113 |
| Lupinus albus | Lalb_Chr10 | 6 | CH_lal_106 | 4 | 4 | 0.000000000434141 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_258 | 4 | 4 | 0.0000000013321 |
| Magnolia biondii | Chr07 | 6 | CH_mbi_441 | 4 | 11 | 0.000000279211 |
| Magnolia biondii | Chr05 | 6 | CH_mbi_601 | 4 | 18 | 0.00000405824 |
| Malus domestica | Chr13 | 6 | CH_mdo_574 | 3 | 3 | 0.000000981464 |
| Malus domestica | Chr15 | 6 | CH_mdo_859 | 3 | 8 | 0.0000549099 |
| Manihot esculenta | Chromosome04 | 6 | CH_mes_526 | 3 | 18 | 0.0000911456 |
| Medicago truncatula | chr2 | 6 | CH_mtr_1316 | 3 | 7 | 0.000578869 |
| Petunia axillaris | Peaxi162Scf00457 | 6 | CH_pax_315 | 3 | 3 | 0.00000719496 |
| Petunia axillaris | Peaxi162Scf00023 | 6 | CH_pax_74 | 5 | 6 | 0.0000000000128177 |
| Papaver somniferum | NC_039368.1 | 6 | CH_pso_729 | 3 | 5 | 0.000011721 |
| Papaver somniferum | NC_039359.1 | 6 | CH_pso_837 | 3 | 7 | 0.0000410095 |
| Phaseolus vulgaris | Chr04 | 6 | CH_pvu_310 | 5 | 58 | 0.00000127004 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_330 | 3 | 3 | 0.00000231593 |
| Quercus lobata | 3 | 6 | CH_qlo_1149 | 3 | 5 | 0.0000223787 |
| Salvia bowleyana | GWHASIU00000007 | 6 | CH_sbo_562 | 2 | 2 | 0.000136494 |
| Salix brachista | GWHAAZH00000010 | 6 | CH_sbr_652 | 2 | 2 | 0.00063014 |
| Sechium edule | LG06 | 6 | CH_sed_364 | 3 | 6 | 0.000124436 |
| Solanum lycopersicum | SL4.0ch07 | 6 | CH_sly_375 | 3 | 3 | 0.000000852661 |
| Solanum pennellii | Spenn-ch07 | 6 | CH_spe_313 | 3 | 3 | 0.000000249282 |
| Solanum tuberosum | ST4.03ch07 | 6 | CH_stu_158 | 5 | 7 | 0.00000000000326069 |
| Trochodendron aralioides | group16 | 6 | CH_tar_943 | 2 | 2 | 0.000900549 |
| Theobroma cacao | Chromosome_10 | 6 | CH_tca_26 | 10 | 15 | 2.50941e-26 |
| Tripterygium wilfordii | NC_052251.1 | 6 | CH_twi_106 | 5 | 5 | 0.000000000431111 |
| Tripterygium wilfordii | NC_052253.1 | 6 | CH_twi_26 | 10 | 21 | 1.15715e-18 |
| Tripterygium wilfordii | NC_052254.1 | 6 | CH_twi_356 | 4 | 10 | 0.0000565315 |
| Tripterygium wilfordii | NC_052243.1 | 6 | CH_twi_416 | 3 | 3 | 0.000167798 |
| Tripterygium wilfordii | NC_052233.1 | 6 | CH_twi_417 | 3 | 3 | 0.000167798 |
| Tripterygium wilfordii | NC_052237.1 | 6 | CH_twi_418 | 3 | 3 | 0.000167798 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |