Functional clusters

Information

  • Type InterPro
  • Description NADH:flavin oxidoreductase/NADH oxidase, N-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr13 5 CH_acertr_234 3 3 0.00000002982
Arabidopsis lyrata scaffold_2 5 CH_aly_671 2 2 0.000660044
Amaranthus hybridus AmaHy_arrow1_Scaffold_5 5 CH_amhyb_51 4 4 0.000000000225474
Aquilegia oxysepala CHR02 5 CH_aox_56 4 4 0.00000000000773835
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_593 3 4 0.000000645288
Arabidopsis thaliana Chr1 5 CH_ath_547 2 2 0.000429738
Amborella trichopoda AmTr_v1.0_scaffold00071 5 CH_atr_64 5 7 0.000000000000351257
Brassica carinata ChrB05 5 CH_bca_568 3 3 0.000000150796
Camellia sinensis var. sinensis Chr9 5 CH_camsi_118 5 6 0.00000000000000417832
Cannabis sativa NC_044371.1 5 CH_cansat_126 4 9 0.00000000053501
Capsicum annuum PGAv.1.6.scaffold855 5 CH_can_341 3 3 0.000000573281
Cicer arietinum L. Ca_LG8_v3 5 CH_car_146 4 48 0.00000957746
Coffea canephora chr10 5 CH_ccan_134 4 28 0.0000000112865
Coffea canephora chr10 5 CH_ccan_64 5 52 0.0000000000263966
Cardamine hirsuta Chr8 5 CH_chi_736 3 23 0.000443001
Carya illinoinensis Chr03 5 CH_cil_158 5 6 0.00000000000290085
Carya illinoinensis Chr04 5 CH_cil_28 9 9 3.53588e-27
Corchorus olitorius AWUE01016378.1 5 CH_col_56 3 3 0.000000128001
Carica papaya supercontig_21 5 CH_cpa_481 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_2389 5 CH_cqu_109 6 10 0.0000000000000840982
Chenopodium quinoa C_Quinoa_Scaffold_3163 5 CH_cqu_338 4 8 0.000000163183
Chenopodium quinoa C_Quinoa_Scaffold_4329 5 CH_cqu_868 3 8 0.000289904
Daucus carota DCARv2_Chr1 5 CH_dca_156 4 9 0.000000012347
Daucus carota DCARv2_Chr3 5 CH_dca_244 3 3 0.000000512531
Durio zibethinus NW_019167915.1 5 CH_dzi_221 3 3 0.000000386688
Durio zibethinus NW_019168381.1 5 CH_dzi_222 3 3 0.000000386688
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_133 4 4 0.000000000271342
Erigeron canadensis Conyza_canadensis_scaffold:4 5 CH_eca_451 4 34 0.0000125077
Eucalyptus grandis Chr03 5 CH_egr_47 11 12 9.64754e-34
Erythranthe guttata scaffold_2 5 CH_egut_30 9 9 2.46683e-28
Fragaria vesca Fvb1 5 CH_fve_63 6 7 1.03265e-16
Fragaria vesca Fvb5 5 CH_fve_75 6 10 0.00000000000000309627
Gossypium hirsutum D05 5 CH_ghi_490 3 3 0.000000176463
Helianthus annuus HanXRQChr03 5 CH_han_113 6 7 0.00000000000000182644
Helianthus annuus HanXRQChr04 5 CH_han_636 3 3 0.00000453366
Helianthus annuus HanXRQChr10 5 CH_han_637 3 3 0.00000453366
Lupinus albus Lalb_Chr07 5 CH_lal_235 3 3 0.000000495806
Lotus japonicus Contig00408 5 CH_lja_254 3 4 0.00000107369
Lonicera japonica GWHAAZE00000004 5 CH_lonja_121 7 9 4.1614e-18
Lonicera japonica GWHAAZE00000006 5 CH_lonja_529 5 46 0.00000111688
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_217 4 5 0.000000000672158
Magnolia biondii Chr03 5 CH_mbi_85 6 10 2.68043e-16
Malus domestica Chr15 5 CH_mdo_20 10 25 3.00493e-26
Manihot esculenta Chromosome18 5 CH_mes_108 5 6 0.0000000000000131399
Medicago truncatula chr5 5 CH_mtr_68 8 12 3.96614e-23
Oryza sativa ssp. japonica chr06 5 CH_osa_75 6 13 0.0000000000000146442
Petunia axillaris Peaxi162Scf00688 5 CH_pax_180 3 3 0.0000000742514
Punica granatum NC_045134.1 5 CH_pgr_159 4 6 0.00000000239481
Prunus persica Pp01 5 CH_ppe_40 8 9 1.64089e-24
Pisum sativum chr2LG1 5 CH_psa_30 6 6 1.82536e-18
Papaver somniferum NC_039365.1 5 CH_pso_100 6 8 1.41707e-16
Papaver somniferum NC_039359.1 5 CH_pso_335 4 6 0.00000000249249
Papaver somniferum NC_039360.1 5 CH_pso_901 3 9 0.0000728408
Populus trichocarpa Chr13 5 CH_ptr_107 5 5 0.0000000000000210985
Phaseolus vulgaris Chr02 5 CH_pvu_314 3 3 0.00000133611
Quercus lobata 9 5 CH_qlo_162 10 75 4.55995e-20
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_36 11 18 9.50296e-31
Rhododendron simsii chr11 5 CH_rsi_287 4 7 0.000000000987315
Salvia bowleyana GWHASIU00000005 5 CH_sbo_263 3 3 0.0000000310517
Salix brachista GWHAAZH00000013 5 CH_sbr_56 6 7 1.31471e-17
Simmondsia chinensis GWHAASQ00000010 5 CH_sci_512 2 2 0.000851426
Sechium edule LG01 5 CH_sed_176 3 3 0.000000267217
Sechium edule LG11 5 CH_sed_177 3 3 0.000000267217
Sequoiadendron giganteum chr3 5 CH_sgi_1555 3 3 0.0000351712
Sequoiadendron giganteum chr3 5 CH_sgi_39 17 41 7.26849e-38
Sequoiadendron giganteum chr11 5 CH_sgi_463 6 8 0.000000000000662637
Sequoiadendron giganteum chr10 5 CH_sgi_86 11 12 8.1435e-29
Solanum lycopersicum SL4.0ch04 5 CH_sly_361 3 3 0.000000620117
Solanum lycopersicum SL4.0ch11 5 CH_sly_556 3 9 0.0000520325
Solanum pennellii Spenn-ch06 5 CH_spe_312 3 3 0.000000249282
Solanum pennellii Spenn-ch11 5 CH_spe_388 3 5 0.00000249221
Solanum tuberosum ST4.03ch11 5 CH_stu_187 5 14 0.0000000000477802
Selenicereus undatus Scaffold_2055 5 CH_sun_21 5 6 0.00000000000099357
Theobroma cacao Chromosome_2 5 CH_tca_197 4 4 0.000000000388958
Theobroma cacao Chromosome_6 5 CH_tca_418 3 4 0.00000530909
Tarenaya hassleriana NW_010964923.1 5 CH_tha_334 2 2 0.00069847
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_12 8 11 4.76318e-21
Tripterygium wilfordii NC_052249.1 5 CH_twi_37 5 5 0.0000000000000040581
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_103 4 4 0.0000000000842619
Vigna mungo CM024074.1 5 CH_vmu_200 3 3 0.000000526065
Vitis vinifera chr18 5 CH_vvi_52 7 8 4.0278e-20
Acer truncatum chr13 6 CH_acertr_234 3 3 0.00000002982
Arabidopsis lyrata scaffold_2 6 CH_aly_671 2 2 0.000660044
Amaranthus hybridus AmaHy_arrow1_Scaffold_5 6 CH_amhyb_51 4 4 0.000000000225474
Aquilegia oxysepala CHR02 6 CH_aox_56 4 4 0.00000000000773835
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_593 3 4 0.000000645288
Arabidopsis thaliana Chr1 6 CH_ath_547 2 2 0.000429738
Amborella trichopoda AmTr_v1.0_scaffold00071 6 CH_atr_64 5 7 0.000000000000351257
Brassica carinata ChrB05 6 CH_bca_568 3 3 0.000000150796
Camellia sinensis var. sinensis Chr9 6 CH_camsi_118 5 6 0.00000000000000417832
Cannabis sativa NC_044371.1 6 CH_cansat_126 4 9 0.00000000053501
Capsicum annuum PGAv.1.6.scaffold855 6 CH_can_341 3 3 0.000000573281
Cicer arietinum L. Ca_LG8_v3 6 CH_car_146 4 48 0.00000957746
Coffea canephora chr10 6 CH_ccan_134 4 28 0.0000000112865
Coffea canephora chr10 6 CH_ccan_64 5 52 0.0000000000263966
Cardamine hirsuta Chr8 6 CH_chi_736 3 23 0.000443001
Carya illinoinensis Chr03 6 CH_cil_158 5 6 0.00000000000290085
Carya illinoinensis Chr04 6 CH_cil_28 9 9 3.53588e-27
Corchorus olitorius AWUE01016378.1 6 CH_col_56 3 3 0.000000128001
Carica papaya supercontig_21 6 CH_cpa_481 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_2389 6 CH_cqu_109 6 10 0.0000000000000840982
Chenopodium quinoa C_Quinoa_Scaffold_3163 6 CH_cqu_338 4 8 0.000000163183
Chenopodium quinoa C_Quinoa_Scaffold_4329 6 CH_cqu_868 3 8 0.000289904
Daucus carota DCARv2_Chr1 6 CH_dca_156 4 9 0.000000012347
Daucus carota DCARv2_Chr3 6 CH_dca_244 3 3 0.000000512531
Durio zibethinus NW_019167915.1 6 CH_dzi_221 3 3 0.000000386688
Durio zibethinus NW_019168381.1 6 CH_dzi_222 3 3 0.000000386688
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_133 4 4 0.000000000271342
Erigeron canadensis Conyza_canadensis_scaffold:4 6 CH_eca_451 4 34 0.0000125077
Eucalyptus grandis Chr03 6 CH_egr_47 11 12 9.64754e-34
Erythranthe guttata scaffold_2 6 CH_egut_30 9 9 2.46683e-28
Fragaria x ananassa Fvb5-3 6 CH_fan_176 5 14 0.000000000268084
Fragaria x ananassa Fvb5-2 6 CH_fan_254 4 6 0.000000011661
Fragaria x ananassa Fvb5-1 6 CH_fan_48 7 15 8.67503e-17
Fragaria x ananassa Fvb1-1 6 CH_fan_513 3 3 0.00000280209
Fragaria x ananassa Fvb1-2 6 CH_fan_632 3 4 0.0000112059
Fragaria x ananassa Fvb1-4 6 CH_fan_94 5 5 0.000000000000208677
Fragaria vesca Fvb1 6 CH_fve_63 6 7 1.03265e-16
Fragaria vesca Fvb5 6 CH_fve_75 6 10 0.00000000000000309627
Gossypium hirsutum D05 6 CH_ghi_490 3 3 0.000000176463
Helianthus annuus HanXRQChr03 6 CH_han_113 6 7 0.00000000000000182644
Helianthus annuus HanXRQChr04 6 CH_han_636 3 3 0.00000453366
Helianthus annuus HanXRQChr10 6 CH_han_637 3 3 0.00000453366
Lupinus albus Lalb_Chr07 6 CH_lal_235 3 3 0.000000495806
Lotus japonicus Contig00408 6 CH_lja_254 3 4 0.00000107369
Lonicera japonica GWHAAZE00000004 6 CH_lonja_121 7 9 4.1614e-18
Lonicera japonica GWHAAZE00000006 6 CH_lonja_529 5 46 0.00000111688
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_217 4 5 0.000000000672158
Magnolia biondii Chr03 6 CH_mbi_85 6 10 2.68043e-16
Malus domestica Chr15 6 CH_mdo_20 10 25 3.00493e-26
Manihot esculenta Chromosome18 6 CH_mes_108 5 6 0.0000000000000131399
Medicago truncatula chr5 6 CH_mtr_68 8 12 3.96614e-23
Oryza sativa ssp. japonica chr06 6 CH_osa_75 6 13 0.0000000000000146442
Petunia axillaris Peaxi162Scf00688 6 CH_pax_180 3 3 0.0000000742514
Punica granatum NC_045134.1 6 CH_pgr_159 4 6 0.00000000239481
Prunus persica Pp01 6 CH_ppe_40 8 9 1.64089e-24
Pisum sativum chr2LG1 6 CH_psa_30 6 6 1.82536e-18
Papaver somniferum NC_039365.1 6 CH_pso_100 6 8 1.41707e-16
Papaver somniferum NC_039359.1 6 CH_pso_335 4 6 0.00000000249249
Papaver somniferum NC_039360.1 6 CH_pso_901 3 9 0.0000728408
Populus trichocarpa Chr13 6 CH_ptr_107 5 5 0.0000000000000210985
Phaseolus vulgaris Chr02 6 CH_pvu_314 3 3 0.00000133611
Quercus lobata 9 6 CH_qlo_162 10 75 4.55995e-20
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_36 11 18 9.50296e-31
Rhododendron simsii chr11 6 CH_rsi_287 4 7 0.000000000987315
Salvia bowleyana GWHASIU00000005 6 CH_sbo_263 3 3 0.0000000310517
Salix brachista GWHAAZH00000013 6 CH_sbr_56 6 7 1.31471e-17
Simmondsia chinensis GWHAASQ00000010 6 CH_sci_512 2 2 0.000851426
Sechium edule LG01 6 CH_sed_176 3 3 0.000000267217
Sechium edule LG11 6 CH_sed_177 3 3 0.000000267217
Sequoiadendron giganteum chr3 6 CH_sgi_1555 3 3 0.0000351712
Sequoiadendron giganteum chr3 6 CH_sgi_39 17 41 7.26849e-38
Sequoiadendron giganteum chr11 6 CH_sgi_463 6 8 0.000000000000662637
Sequoiadendron giganteum chr10 6 CH_sgi_86 11 12 8.1435e-29
Solanum lycopersicum SL4.0ch04 6 CH_sly_361 3 3 0.000000620117
Solanum lycopersicum SL4.0ch11 6 CH_sly_556 3 9 0.0000520325
Solanum pennellii Spenn-ch06 6 CH_spe_312 3 3 0.000000249282
Solanum pennellii Spenn-ch11 6 CH_spe_388 3 5 0.00000249221
Solanum tuberosum ST4.03ch11 6 CH_stu_187 5 14 0.0000000000477802
Selenicereus undatus Scaffold_2055 6 CH_sun_21 5 6 0.00000000000099357
Theobroma cacao Chromosome_2 6 CH_tca_197 4 4 0.000000000388958
Theobroma cacao Chromosome_6 6 CH_tca_418 3 4 0.00000530909
Tarenaya hassleriana NW_010964923.1 6 CH_tha_334 2 2 0.00069847
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_12 8 11 4.76318e-21
Tripterygium wilfordii NC_052249.1 6 CH_twi_37 5 5 0.0000000000000040581
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_103 4 4 0.0000000000842619
Vigna mungo CM024074.1 6 CH_vmu_200 3 3 0.000000526065
Vitis vinifera chr18 6 CH_vvi_52 7 8 4.0278e-20

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001