Functional clusters

Information

  • Type InterPro
  • Description NADH-quinone oxidoreductase, subunit D

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 5 CH_amhyb_451 2 2 0.000841751
Aquilegia oxysepala CHR04 5 CH_aox_167 3 3 0.000000337686
Brassica rapa Brapa_scaffold_48 5 CH_bra_178 4 17 0.000000279099
Cicer arietinum L. Ca_LG6_v3 5 CH_car_268 2 3 0.000233481
Ceratophyllum demersum 1 5 CH_cde_159 3 23 0.0000165582
Carpinus fangiana scaffold13 5 CH_cfa_474 2 2 0.000227204
Lonicera japonica GWHAAZE00000002 5 CH_lonja_902 2 2 0.000179662
Magnolia biondii Chr10 5 CH_mbi_1193 2 6 0.000728421
Marchantia polymorpha scaffold_48 5 CH_mpo_186 2 2 0.000331327
Nelumbo nucifera chr1 5 CH_nnu_494 2 2 0.00028901
Rhododendron simsii Mt 5 CH_rsi_356 3 4 0.0000000249853
Salix brachista GWHAAZH00000020 5 CH_sbr_594 2 2 0.000378084
Schrenkiella parvula ch3-4 5 CH_spa_230 2 4 0.000078734
Solanum pennellii Spenn-ch05 5 CH_spe_279 3 3 0.000000103868
Solanum tuberosum ST4.03ch06 5 CH_stu_776 2 2 0.000307472
Theobroma cacao Chromosome_8 5 CH_tca_605 2 2 0.000219716
Vitis vinifera chrUn 5 CH_vvi_763 2 2 0.00076063
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 6 CH_amhyb_451 2 2 0.000841751
Aquilegia oxysepala CHR04 6 CH_aox_167 3 3 0.000000337686
Brassica rapa Brapa_scaffold_48 6 CH_bra_178 4 17 0.000000279099
Cicer arietinum L. Ca_LG6_v3 6 CH_car_268 2 3 0.000233481
Ceratophyllum demersum 1 6 CH_cde_159 3 23 0.0000165582
Carpinus fangiana scaffold13 6 CH_cfa_474 2 2 0.000227204
Lonicera japonica GWHAAZE00000002 6 CH_lonja_902 2 2 0.000179662
Magnolia biondii Chr10 6 CH_mbi_1193 2 6 0.000728421
Marchantia polymorpha scaffold_48 6 CH_mpo_186 2 2 0.000331327
Nelumbo nucifera chr1 6 CH_nnu_494 2 2 0.00028901
Rhododendron simsii Mt 6 CH_rsi_356 3 4 0.0000000249853
Salix brachista GWHAAZH00000020 6 CH_sbr_594 2 2 0.000378084
Schrenkiella parvula ch3-4 6 CH_spa_230 2 4 0.000078734
Solanum pennellii Spenn-ch05 6 CH_spe_279 3 3 0.000000103868
Solanum tuberosum ST4.03ch06 6 CH_stu_776 2 2 0.000307472
Theobroma cacao Chromosome_8 6 CH_tca_605 2 2 0.000219716
Vitis vinifera chrUn 6 CH_vvi_763 2 2 0.00076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001